listing git files failed - pretending there aren't any warning: no previously-included files found matching 'Tests/Gck/DGVC_GCK.zip' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.py{}' found anywhere in distribution warning: no previously-included files matching '*.py-e' found anywhere in distribution warning: no previously-included files found matching 'Bio/Align/substitution_matrices/data/README.txt' Bio/cpairwise2module.c: In function ‘_get_match_score’: Bio/cpairwise2module.c:60:5: warning: ‘PyEval_CallObjectWithKeywords’ is deprecated [-Wdeprecated-declarations] 60 | if(!(py_result = PyEval_CallObject(py_match_fn, py_arglist))) | ^~ In file included from /usr/include/python3.9/Python.h:140, from Bio/cpairwise2module.c:16: /usr/include/python3.9/ceval.h:17:43: note: declared here 17 | Py_DEPRECATED(3.9) 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biopython-1.78/Tests/Quality/sanger_faked.fastq biopython-1.78/Tests/Quality/wrapping_as_solexa.fastq biopython-1.78/Tests/Quality/misc_dna_as_sanger.fastq biopython-1.78/Tests/Quality/sanger_full_range_as_sanger.fastq biopython-1.78/Tests/Quality/error_diff_ids.fastq biopython-1.78/Tests/test_lowess.py biopython-1.78/Tests/requires_internet.py biopython-1.78/Tests/test_SCOP_Dom.py biopython-1.78/Tests/SwissProt/ biopython-1.78/Tests/SwissProt/multi_ex.list biopython-1.78/Tests/SwissProt/multi_ex.fasta biopython-1.78/Tests/SwissProt/P97881.xml biopython-1.78/Tests/SwissProt/sp016 biopython-1.78/Tests/SwissProt/multi_ex.gff biopython-1.78/Tests/SwissProt/sp002 biopython-1.78/Tests/SwissProt/sp012 biopython-1.78/Tests/SwissProt/P60137.txt biopython-1.78/Tests/SwissProt/sp007 biopython-1.78/Tests/SwissProt/P84001.xml biopython-1.78/Tests/SwissProt/sp009 biopython-1.78/Tests/SwissProt/keywlist2.txt biopython-1.78/Tests/SwissProt/sp013 biopython-1.78/Tests/SwissProt/H2CNN8.txt biopython-1.78/Tests/SwissProt/uni001 biopython-1.78/Tests/SwissProt/F2CXE6.txt biopython-1.78/Tests/SwissProt/Q13639.xml biopython-1.78/Tests/SwissProt/sp008 biopython-1.78/Tests/SwissProt/uni002 biopython-1.78/Tests/SwissProt/P0CK95.txt biopython-1.78/Tests/SwissProt/sp015 biopython-1.78/Tests/SwissProt/multi_ex.txt biopython-1.78/Tests/SwissProt/README biopython-1.78/Tests/SwissProt/sp005 biopython-1.78/Tests/SwissProt/P0A186.txt biopython-1.78/Tests/SwissProt/sp006 biopython-1.78/Tests/SwissProt/multi_ex.xml biopython-1.78/Tests/SwissProt/multi_ex.rdf biopython-1.78/Tests/SwissProt/R5HY77.xml biopython-1.78/Tests/SwissProt/H2CNN8.xml biopython-1.78/Tests/SwissProt/uni003 biopython-1.78/Tests/SwissProt/sp011 biopython-1.78/Tests/SwissProt/Q13639.txt biopython-1.78/Tests/SwissProt/O23729.txt biopython-1.78/Tests/SwissProt/F2CXE6.xml biopython-1.78/Tests/SwissProt/keywlist.txt biopython-1.78/Tests/SwissProt/sp001 biopython-1.78/Tests/SwissProt/sp003 biopython-1.78/Tests/SwissProt/sp010 biopython-1.78/Tests/common_BioSQL_online.py biopython-1.78/Tests/test_PAML_baseml.py biopython-1.78/Tests/test_SCOP_Hie.py biopython-1.78/Tests/test_PopGen_GenePop_EasyController.py biopython-1.78/Tests/test_Medline.py biopython-1.78/Tests/test_prodoc.py biopython-1.78/Tests/test_PDB_vectors.py biopython-1.78/Tests/NMR/ biopython-1.78/Tests/NMR/out_example.xpk biopython-1.78/Tests/NMR/noed.xpk biopython-1.78/Tests/test_Crystal.py biopython-1.78/Tests/Registry/ biopython-1.78/Tests/Registry/seqs.fasta biopython-1.78/Tests/Registry/bt001 biopython-1.78/Tests/Registry/EDD_RAT.dat biopython-1.78/Tests/test_AlignIO_FastaIO.py biopython-1.78/Tests/test_KGML_graphics_online.py biopython-1.78/Tests/UniProt/ biopython-1.78/Tests/UniProt/goa_yeast.gpa.59.gpa biopython-1.78/Tests/UniProt/gene_association.goa_yeast.1.gaf biopython-1.78/Tests/UniProt/gp_information.goa_yeast.28.gpi biopython-1.78/Tests/UniProt/goa_yeast.gaf biopython-1.78/Tests/test_SeqIO_FastaIO.py biopython-1.78/Tests/test_PDB_internal_coords.py biopython-1.78/Tests/test_SeqIO_index.py biopython-1.78/Tests/PopGen/ biopython-1.78/Tests/PopGen/haplo2.gen biopython-1.78/Tests/PopGen/big.gen biopython-1.78/Tests/PopGen/c2space.gen biopython-1.78/Tests/PopGen/c2line.gen biopython-1.78/Tests/PopGen/c3space.gen biopython-1.78/Tests/PopGen/haplo3.gen biopython-1.78/Tests/PopGen/c3line.gen biopython-1.78/Tests/PopGen/README biopython-1.78/Tests/PopGen/haplo.gen biopython-1.78/Tests/SCOP/ biopython-1.78/Tests/SCOP/dir.cla.scop.txt_test biopython-1.78/Tests/SCOP/testDom.txt biopython-1.78/Tests/SCOP/scopseq-test/ biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id biopython-1.78/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id biopython-1.78/Tests/SCOP/raftest.txt biopython-1.78/Tests/SCOP/dir.des.scop.txt_test biopython-1.78/Tests/SCOP/dir.hie.scop.txt_test biopython-1.78/Tests/test_PDB_MMCIF2Dict.py biopython-1.78/Tests/CDAO/ biopython-1.78/Tests/CDAO/test.cdao biopython-1.78/Tests/test_PDB_StructureAlignment.py biopython-1.78/Tests/Xdna/ biopython-1.78/Tests/Xdna/sample-a.xdna biopython-1.78/Tests/Xdna/sample-c.xprt biopython-1.78/Tests/Xdna/sample-b.xdna biopython-1.78/Tests/test_TCoffee_tool.py biopython-1.78/Tests/test_MSAProbs_tool.py biopython-1.78/Tests/.coveragerc biopython-1.78/Tests/test_SearchIO_hmmer3_text_index.py biopython-1.78/Tests/NBRF/ biopython-1.78/Tests/NBRF/clustalw.pir biopython-1.78/Tests/NBRF/B_nuc.pir biopython-1.78/Tests/NBRF/DMB_prot.pir biopython-1.78/Tests/NBRF/DMA_nuc.pir biopython-1.78/Tests/NBRF/Cw_prot.pir biopython-1.78/Tests/test_SCOP_Raf.py biopython-1.78/Tests/test_BioSQL_MySQLdb.py biopython-1.78/Tests/BWA/ biopython-1.78/Tests/BWA/human_g1k_v37_truncated.fasta biopython-1.78/Tests/BWA/HNSCC1_1_truncated.fastq biopython-1.78/Tests/BWA/HNSCC1_2_truncated.fastq biopython-1.78/Tests/test_phenotype_fit.py biopython-1.78/Tests/test_PopGen_GenePop_nodepend.py biopython-1.78/Tests/test_NCBITextParser.py biopython-1.78/Tests/test_KeyWList.py biopython-1.78/Tests/test_Phylo_matplotlib.py biopython-1.78/Tests/test_ClustalOmega_tool.py biopython-1.78/Tests/test_SCOP_Des.py biopython-1.78/Tests/test_motifs_online.py biopython-1.78/Tests/test_SearchIO_interproscan_xml.py biopython-1.78/Tests/test_align.py biopython-1.78/Tests/test_PDB_MMCIFParser.py biopython-1.78/Tests/test_File.py biopython-1.78/Tests/test_GenBank.py biopython-1.78/Tests/Cellosaurus/ biopython-1.78/Tests/Cellosaurus/cell_lines_2.txt biopython-1.78/Tests/Cellosaurus/cell_lines_1.txt biopython-1.78/Tests/Cellosaurus/cell_lines_3.txt biopython-1.78/Tests/test_BioSQL_sqlite3.py biopython-1.78/Tests/test_KGML_nographics.py biopython-1.78/Tests/Mauve/ biopython-1.78/Tests/Mauve/simple.xmfa biopython-1.78/Tests/Mauve/simple.fa biopython-1.78/Tests/Mauve/simple.xmfa.backbone biopython-1.78/Tests/Mauve/simple_short.xmfa biopython-1.78/Tests/Mauve/simple.xmfa.bbcols biopython-1.78/Tests/test_SearchIO_blat_psl_index.py biopython-1.78/Tests/test_SeqIO_write.py biopython-1.78/Tests/test_Entrez_online.py biopython-1.78/Tests/test_Mafft_tool.py biopython-1.78/Tests/test_AlignIO_convert.py biopython-1.78/Tests/test_SeqIO.py biopython-1.78/Tests/test_PAML_yn00.py biopython-1.78/Tests/test_KEGG_online.py biopython-1.78/Tests/PhyloXML/ biopython-1.78/Tests/PhyloXML/bcl_2.xml biopython-1.78/Tests/PhyloXML/phyloxml_examples.xml biopython-1.78/Tests/PhyloXML/distribution.xml biopython-1.78/Tests/PhyloXML/apaf.xml biopython-1.78/Tests/PhyloXML/example.xml biopython-1.78/Tests/PhyloXML/made_up.xml biopython-1.78/Tests/PhyloXML/o_tol_332_d_dollo.xml biopython-1.78/Tests/test_KEGG.py biopython-1.78/Tests/test_PDB_SMCRA.py biopython-1.78/Tests/Stockholm/ biopython-1.78/Tests/Stockholm/simple.sth biopython-1.78/Tests/Stockholm/funny.sth biopython-1.78/Tests/Wise/ biopython-1.78/Tests/Wise/human_114_g02_exons.fna_01 biopython-1.78/Tests/Wise/human_114_g01_exons.fna_01 biopython-1.78/Tests/test_Uniprot.py biopython-1.78/Tests/test_EMBL_unittest.py biopython-1.78/Tests/Nexus/ biopython-1.78/Tests/Nexus/vSysLab_Heptascelio_no-states_10+chars.nex biopython-1.78/Tests/Nexus/int_node_labels.nwk biopython-1.78/Tests/Nexus/bats.nex biopython-1.78/Tests/Nexus/ByteOrderMarkFile.nwk biopython-1.78/Tests/Nexus/test.new biopython-1.78/Tests/Nexus/vSysLab_Ganaspidium_multistate.nex biopython-1.78/Tests/Nexus/vSysLab_Oreiscelio_discrete+continuous.nex biopython-1.78/Tests/Nexus/test_Nexus_input.nex biopython-1.78/Tests/Nexus/codonposset.nex biopython-1.78/Tests/test_Blast_Record.py biopython-1.78/Tests/test_GraphicsChromosome.py biopython-1.78/Tests/test_Restriction.py biopython-1.78/Tests/test_PDB_PDBIO.py biopython-1.78/LICENSE.rst running install running build running build_py creating build creating build/lib.linux-x86_64-3.9 creating build/lib.linux-x86_64-3.9/Bio copying Bio/_utils.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/kNN.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/bgzf.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/pairwise2.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/SeqFeature.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/__init__.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/MarkovModel.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/File.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/MaxEntropy.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/LogisticRegression.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/SeqRecord.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/Seq.py -> build/lib.linux-x86_64-3.9/Bio copying Bio/NaiveBayes.py -> build/lib.linux-x86_64-3.9/Bio creating build/lib.linux-x86_64-3.9/Bio/Affy copying Bio/Affy/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Affy copying Bio/Affy/CelFile.py -> build/lib.linux-x86_64-3.9/Bio/Affy creating build/lib.linux-x86_64-3.9/Bio/Align copying Bio/Align/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Align copying Bio/Align/AlignInfo.py -> build/lib.linux-x86_64-3.9/Bio/Align creating build/lib.linux-x86_64-3.9/Bio/Align/Applications copying Bio/Align/Applications/_Mafft.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications copying Bio/Align/Applications/_Dialign.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications copying Bio/Align/Applications/_MSAProbs.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications copying Bio/Align/Applications/_Clustalw.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications copying Bio/Align/Applications/_Muscle.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications copying Bio/Align/Applications/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications copying Bio/Align/Applications/_ClustalOmega.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications copying Bio/Align/Applications/_TCoffee.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications copying Bio/Align/Applications/_Probcons.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications copying Bio/Align/Applications/_Prank.py -> build/lib.linux-x86_64-3.9/Bio/Align/Applications creating build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices copying Bio/Align/substitution_matrices/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices creating build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/NexusIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/ClustalIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/PhylipIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/EmbossIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/FastaIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/MauveIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/StockholmIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/MsfIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/Interfaces.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO copying Bio/AlignIO/MafIO.py -> build/lib.linux-x86_64-3.9/Bio/AlignIO creating build/lib.linux-x86_64-3.9/Bio/Alphabet copying Bio/Alphabet/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Alphabet creating build/lib.linux-x86_64-3.9/Bio/Application copying Bio/Application/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Application creating build/lib.linux-x86_64-3.9/Bio/Blast copying Bio/Blast/Record.py -> build/lib.linux-x86_64-3.9/Bio/Blast copying Bio/Blast/NCBIWWW.py -> build/lib.linux-x86_64-3.9/Bio/Blast copying Bio/Blast/NCBIXML.py -> build/lib.linux-x86_64-3.9/Bio/Blast copying Bio/Blast/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Blast copying Bio/Blast/Applications.py -> build/lib.linux-x86_64-3.9/Bio/Blast copying Bio/Blast/ParseBlastTable.py -> build/lib.linux-x86_64-3.9/Bio/Blast creating build/lib.linux-x86_64-3.9/Bio/CAPS copying Bio/CAPS/__init__.py -> build/lib.linux-x86_64-3.9/Bio/CAPS creating build/lib.linux-x86_64-3.9/Bio/Cluster copying Bio/Cluster/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Cluster creating build/lib.linux-x86_64-3.9/Bio/codonalign copying Bio/codonalign/__init__.py -> build/lib.linux-x86_64-3.9/Bio/codonalign copying Bio/codonalign/codonalignment.py -> build/lib.linux-x86_64-3.9/Bio/codonalign copying Bio/codonalign/codonseq.py -> build/lib.linux-x86_64-3.9/Bio/codonalign copying Bio/codonalign/chisq.py -> build/lib.linux-x86_64-3.9/Bio/codonalign creating build/lib.linux-x86_64-3.9/Bio/Compass copying Bio/Compass/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Compass creating build/lib.linux-x86_64-3.9/Bio/Crystal copying Bio/Crystal/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Crystal creating build/lib.linux-x86_64-3.9/Bio/Data copying Bio/Data/CodonTable.py -> build/lib.linux-x86_64-3.9/Bio/Data copying Bio/Data/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Data copying Bio/Data/IUPACData.py -> build/lib.linux-x86_64-3.9/Bio/Data copying Bio/Data/SCOPData.py -> build/lib.linux-x86_64-3.9/Bio/Data creating build/lib.linux-x86_64-3.9/Bio/Emboss copying Bio/Emboss/Primer3.py -> build/lib.linux-x86_64-3.9/Bio/Emboss copying Bio/Emboss/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Emboss copying Bio/Emboss/Applications.py -> build/lib.linux-x86_64-3.9/Bio/Emboss copying Bio/Emboss/PrimerSearch.py -> build/lib.linux-x86_64-3.9/Bio/Emboss creating build/lib.linux-x86_64-3.9/Bio/Entrez copying Bio/Entrez/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Entrez copying Bio/Entrez/Parser.py -> build/lib.linux-x86_64-3.9/Bio/Entrez creating build/lib.linux-x86_64-3.9/Bio/ExPASy copying Bio/ExPASy/Prosite.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy copying Bio/ExPASy/ScanProsite.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy copying Bio/ExPASy/__init__.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy copying Bio/ExPASy/Enzyme.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy copying Bio/ExPASy/Prodoc.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy copying Bio/ExPASy/cellosaurus.py -> build/lib.linux-x86_64-3.9/Bio/ExPASy creating build/lib.linux-x86_64-3.9/Bio/FSSP copying Bio/FSSP/fssp_rec.py -> build/lib.linux-x86_64-3.9/Bio/FSSP copying Bio/FSSP/__init__.py -> build/lib.linux-x86_64-3.9/Bio/FSSP copying Bio/FSSP/FSSPTools.py -> build/lib.linux-x86_64-3.9/Bio/FSSP creating build/lib.linux-x86_64-3.9/Bio/GenBank copying Bio/GenBank/Record.py -> build/lib.linux-x86_64-3.9/Bio/GenBank copying Bio/GenBank/__init__.py -> build/lib.linux-x86_64-3.9/Bio/GenBank copying Bio/GenBank/Scanner.py -> build/lib.linux-x86_64-3.9/Bio/GenBank copying Bio/GenBank/utils.py -> build/lib.linux-x86_64-3.9/Bio/GenBank creating build/lib.linux-x86_64-3.9/Bio/Geo copying Bio/Geo/Record.py -> build/lib.linux-x86_64-3.9/Bio/Geo copying Bio/Geo/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Geo creating build/lib.linux-x86_64-3.9/Bio/Graphics copying Bio/Graphics/BasicChromosome.py -> build/lib.linux-x86_64-3.9/Bio/Graphics copying Bio/Graphics/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Graphics copying Bio/Graphics/KGML_vis.py -> build/lib.linux-x86_64-3.9/Bio/Graphics copying Bio/Graphics/DisplayRepresentation.py -> build/lib.linux-x86_64-3.9/Bio/Graphics copying Bio/Graphics/ColorSpiral.py -> build/lib.linux-x86_64-3.9/Bio/Graphics copying Bio/Graphics/Distribution.py -> build/lib.linux-x86_64-3.9/Bio/Graphics copying Bio/Graphics/Comparative.py -> build/lib.linux-x86_64-3.9/Bio/Graphics creating build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_FeatureSet.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Graph.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Colors.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Track.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Diagram.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_CrossLink.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_Feature.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram copying Bio/Graphics/GenomeDiagram/_GraphSet.py -> build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram creating build/lib.linux-x86_64-3.9/Bio/HMM copying Bio/HMM/DynamicProgramming.py -> build/lib.linux-x86_64-3.9/Bio/HMM copying Bio/HMM/Utilities.py -> build/lib.linux-x86_64-3.9/Bio/HMM copying Bio/HMM/Trainer.py -> build/lib.linux-x86_64-3.9/Bio/HMM copying Bio/HMM/__init__.py -> build/lib.linux-x86_64-3.9/Bio/HMM copying Bio/HMM/MarkovModel.py -> build/lib.linux-x86_64-3.9/Bio/HMM creating build/lib.linux-x86_64-3.9/Bio/KEGG copying Bio/KEGG/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG copying Bio/KEGG/REST.py -> build/lib.linux-x86_64-3.9/Bio/KEGG creating build/lib.linux-x86_64-3.9/Bio/KEGG/Compound copying Bio/KEGG/Compound/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/Compound creating build/lib.linux-x86_64-3.9/Bio/KEGG/Enzyme copying Bio/KEGG/Enzyme/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/Enzyme creating build/lib.linux-x86_64-3.9/Bio/KEGG/Gene copying Bio/KEGG/Gene/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/Gene creating build/lib.linux-x86_64-3.9/Bio/KEGG/Map copying Bio/KEGG/Map/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/Map creating build/lib.linux-x86_64-3.9/Bio/PDB creating build/lib.linux-x86_64-3.9/Bio/PDB/mmtf copying Bio/PDB/mmtf/__init__.py -> build/lib.linux-x86_64-3.9/Bio/PDB/mmtf copying Bio/PDB/mmtf/mmtfio.py -> build/lib.linux-x86_64-3.9/Bio/PDB/mmtf copying Bio/PDB/mmtf/DefaultParser.py -> build/lib.linux-x86_64-3.9/Bio/PDB/mmtf creating build/lib.linux-x86_64-3.9/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_pathway.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/KGML copying Bio/KEGG/KGML/__init__.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/KGML copying Bio/KEGG/KGML/KGML_parser.py -> build/lib.linux-x86_64-3.9/Bio/KEGG/KGML creating build/lib.linux-x86_64-3.9/Bio/Medline copying Bio/Medline/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Medline creating build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/clusterbuster.py -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/pfm.py -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/transfac.py -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/__init__.py -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/minimal.py -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/meme.py -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/thresholds.py -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/xms.py -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/mast.py -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/matrix.py -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/motifs/alignace.py -> build/lib.linux-x86_64-3.9/Bio/motifs creating build/lib.linux-x86_64-3.9/Bio/motifs/applications copying Bio/motifs/applications/__init__.py -> build/lib.linux-x86_64-3.9/Bio/motifs/applications copying Bio/motifs/applications/_xxmotif.py -> build/lib.linux-x86_64-3.9/Bio/motifs/applications creating build/lib.linux-x86_64-3.9/Bio/motifs/jaspar copying Bio/motifs/jaspar/__init__.py -> build/lib.linux-x86_64-3.9/Bio/motifs/jaspar copying Bio/motifs/jaspar/db.py -> build/lib.linux-x86_64-3.9/Bio/motifs/jaspar creating build/lib.linux-x86_64-3.9/Bio/Nexus copying Bio/Nexus/StandardData.py -> build/lib.linux-x86_64-3.9/Bio/Nexus copying Bio/Nexus/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Nexus copying Bio/Nexus/Nexus.py -> build/lib.linux-x86_64-3.9/Bio/Nexus copying Bio/Nexus/Trees.py -> build/lib.linux-x86_64-3.9/Bio/Nexus copying Bio/Nexus/Nodes.py -> build/lib.linux-x86_64-3.9/Bio/Nexus creating build/lib.linux-x86_64-3.9/Bio/NMR copying Bio/NMR/__init__.py -> build/lib.linux-x86_64-3.9/Bio/NMR copying Bio/NMR/xpktools.py -> build/lib.linux-x86_64-3.9/Bio/NMR copying Bio/NMR/NOEtools.py -> build/lib.linux-x86_64-3.9/Bio/NMR creating build/lib.linux-x86_64-3.9/Bio/Pathway copying Bio/Pathway/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Pathway creating build/lib.linux-x86_64-3.9/Bio/Pathway/Rep copying Bio/Pathway/Rep/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Pathway/Rep copying Bio/Pathway/Rep/MultiGraph.py -> build/lib.linux-x86_64-3.9/Bio/Pathway/Rep copying Bio/Pathway/Rep/Graph.py -> build/lib.linux-x86_64-3.9/Bio/Pathway/Rep copying Bio/PDB/PDBList.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/HSExposure.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/NeighborSearch.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/vectors.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/PDBParser.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/__init__.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/Selection.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/Dice.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/FragmentMapper.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/Polypeptide.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/Structure.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/AbstractPropertyMap.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/ic_data.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/Entity.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/DSSP.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/ResidueDepth.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/PICIO.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/Model.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/internal_coords.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/Chain.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/parse_pdb_header.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/PDBIO.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/ic_rebuild.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/StructureBuilder.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/PSEA.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/Residue.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/StructureAlignment.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/MMCIFParser.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/NACCESS.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/MMCIF2Dict.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/Superimposer.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/SCADIO.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/PDBExceptions.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/Atom.py -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/mmcifio.py -> build/lib.linux-x86_64-3.9/Bio/PDB creating build/lib.linux-x86_64-3.9/Bio/phenotype copying Bio/phenotype/phen_micro.py -> build/lib.linux-x86_64-3.9/Bio/phenotype copying Bio/phenotype/__init__.py -> build/lib.linux-x86_64-3.9/Bio/phenotype copying Bio/phenotype/pm_fitting.py -> build/lib.linux-x86_64-3.9/Bio/phenotype creating build/lib.linux-x86_64-3.9/Bio/PopGen copying Bio/PopGen/__init__.py -> build/lib.linux-x86_64-3.9/Bio/PopGen creating build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/__init__.py -> build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/LargeFileParser.py -> build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/EasyController.py -> build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/FileParser.py -> build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop copying Bio/PopGen/GenePop/Controller.py -> build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop creating build/lib.linux-x86_64-3.9/Bio/Restriction copying Bio/Restriction/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Restriction copying Bio/Restriction/Restriction_Dictionary.py -> build/lib.linux-x86_64-3.9/Bio/Restriction copying Bio/Restriction/PrintFormat.py -> build/lib.linux-x86_64-3.9/Bio/Restriction copying Bio/Restriction/Restriction.py -> build/lib.linux-x86_64-3.9/Bio/Restriction creating build/lib.linux-x86_64-3.9/Bio/SCOP copying Bio/SCOP/Hie.py -> build/lib.linux-x86_64-3.9/Bio/SCOP copying Bio/SCOP/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SCOP copying Bio/SCOP/Des.py -> build/lib.linux-x86_64-3.9/Bio/SCOP copying Bio/SCOP/Raf.py -> build/lib.linux-x86_64-3.9/Bio/SCOP copying Bio/SCOP/Dom.py -> build/lib.linux-x86_64-3.9/Bio/SCOP copying Bio/SCOP/Residues.py -> build/lib.linux-x86_64-3.9/Bio/SCOP copying Bio/SCOP/Cla.py -> build/lib.linux-x86_64-3.9/Bio/SCOP creating build/lib.linux-x86_64-3.9/Bio/SearchIO copying Bio/SearchIO/_utils.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO copying Bio/SearchIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO copying Bio/SearchIO/_index.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO copying Bio/SearchIO/FastaIO.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO copying Bio/SearchIO/BlatIO.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO creating build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/ParserSupport.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy copying Bio/SearchIO/_legacy/NCBIStandalone.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy creating build/lib.linux-x86_64-3.9/Bio/SearchIO/_model copying Bio/SearchIO/_model/hit.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_model copying Bio/SearchIO/_model/query.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_model copying Bio/SearchIO/_model/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_model copying Bio/SearchIO/_model/_base.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_model copying Bio/SearchIO/_model/hsp.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/_model creating build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_text.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_tab.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO copying Bio/SearchIO/BlastIO/blast_xml.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO creating build/lib.linux-x86_64-3.9/Bio/SearchIO/HHsuiteIO copying Bio/SearchIO/HHsuiteIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HHsuiteIO copying Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HHsuiteIO creating build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_tab.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer2_text.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/_base.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO copying Bio/SearchIO/HmmerIO/hmmer3_text.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO creating build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/_base.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO copying Bio/SearchIO/ExonerateIO/exonerate_text.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO creating build/lib.linux-x86_64-3.9/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/InterproscanIO copying Bio/SearchIO/InterproscanIO/interproscan_xml.py -> build/lib.linux-x86_64-3.9/Bio/SearchIO/InterproscanIO creating build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/XdnaIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/SwissIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/AbiIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/GckIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/SffIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/PirIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/IgIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/UniprotIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/TabIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/NibIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/InsdcIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/QualityIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/_index.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/PdbIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/SeqXmlIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/AceIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/FastaIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/PhdIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/SnapGeneIO.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO copying Bio/SeqIO/Interfaces.py -> build/lib.linux-x86_64-3.9/Bio/SeqIO creating build/lib.linux-x86_64-3.9/Bio/SeqUtils copying Bio/SeqUtils/CodonUsage.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils copying Bio/SeqUtils/CheckSum.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils copying Bio/SeqUtils/ProtParamData.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils copying Bio/SeqUtils/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils copying Bio/SeqUtils/MeltingTemp.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils copying Bio/SeqUtils/ProtParam.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils copying Bio/SeqUtils/CodonUsageIndices.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils copying Bio/SeqUtils/lcc.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils copying Bio/SeqUtils/IsoelectricPoint.py -> build/lib.linux-x86_64-3.9/Bio/SeqUtils creating build/lib.linux-x86_64-3.9/Bio/Sequencing copying Bio/Sequencing/Ace.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing copying Bio/Sequencing/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing copying Bio/Sequencing/Phd.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing creating build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_Novoalign.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_samtools.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications copying Bio/Sequencing/Applications/_bwa.py -> build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications creating build/lib.linux-x86_64-3.9/Bio/Statistics copying Bio/Statistics/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Statistics copying Bio/Statistics/lowess.py -> build/lib.linux-x86_64-3.9/Bio/Statistics creating build/lib.linux-x86_64-3.9/Bio/SubsMat copying Bio/SubsMat/FreqTable.py -> build/lib.linux-x86_64-3.9/Bio/SubsMat copying Bio/SubsMat/MatrixInfo.py -> build/lib.linux-x86_64-3.9/Bio/SubsMat copying Bio/SubsMat/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SubsMat creating build/lib.linux-x86_64-3.9/Bio/SVDSuperimposer copying Bio/SVDSuperimposer/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SVDSuperimposer creating build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer copying Bio/PDB/QCPSuperimposer/__init__.py -> build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer creating build/lib.linux-x86_64-3.9/Bio/SwissProt copying Bio/SwissProt/__init__.py -> build/lib.linux-x86_64-3.9/Bio/SwissProt copying Bio/SwissProt/KeyWList.py -> build/lib.linux-x86_64-3.9/Bio/SwissProt creating build/lib.linux-x86_64-3.9/Bio/TogoWS copying Bio/TogoWS/__init__.py -> build/lib.linux-x86_64-3.9/Bio/TogoWS creating build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/_utils.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/NexusIO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/Newick.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/BaseTree.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/NeXMLIO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/NeXML.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/PhyloXMLIO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/_io.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/CDAOIO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/CDAO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/NewickIO.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/_cdao_owl.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/TreeConstruction.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/PhyloXML.py -> build/lib.linux-x86_64-3.9/Bio/Phylo copying Bio/Phylo/Consensus.py -> build/lib.linux-x86_64-3.9/Bio/Phylo creating build/lib.linux-x86_64-3.9/Bio/Phylo/Applications copying Bio/Phylo/Applications/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Fasttree.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Phyml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/Applications copying Bio/Phylo/Applications/_Raxml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/Applications creating build/lib.linux-x86_64-3.9/Bio/Phylo/PAML copying Bio/Phylo/PAML/yn00.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML copying Bio/Phylo/PAML/baseml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_codeml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML copying Bio/Phylo/PAML/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_yn00.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML copying Bio/Phylo/PAML/_paml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML copying Bio/Phylo/PAML/chi2.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML copying Bio/Phylo/PAML/codeml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML copying Bio/Phylo/PAML/_parse_baseml.py -> build/lib.linux-x86_64-3.9/Bio/Phylo/PAML creating build/lib.linux-x86_64-3.9/Bio/UniGene copying Bio/UniGene/__init__.py -> build/lib.linux-x86_64-3.9/Bio/UniGene creating build/lib.linux-x86_64-3.9/Bio/UniProt copying Bio/UniProt/__init__.py -> build/lib.linux-x86_64-3.9/Bio/UniProt copying Bio/UniProt/GOA.py -> build/lib.linux-x86_64-3.9/Bio/UniProt creating build/lib.linux-x86_64-3.9/Bio/Wise copying Bio/Wise/dnal.py -> build/lib.linux-x86_64-3.9/Bio/Wise copying Bio/Wise/__init__.py -> build/lib.linux-x86_64-3.9/Bio/Wise copying Bio/Wise/psw.py -> build/lib.linux-x86_64-3.9/Bio/Wise creating build/lib.linux-x86_64-3.9/BioSQL copying BioSQL/DBUtils.py -> build/lib.linux-x86_64-3.9/BioSQL copying BioSQL/__init__.py -> build/lib.linux-x86_64-3.9/BioSQL copying BioSQL/Loader.py -> build/lib.linux-x86_64-3.9/BioSQL copying BioSQL/BioSeq.py -> build/lib.linux-x86_64-3.9/BioSQL copying BioSQL/BioSeqDatabase.py -> build/lib.linux-x86_64-3.9/BioSQL running egg_info writing biopython.egg-info/PKG-INFO writing dependency_links to biopython.egg-info/dependency_links.txt writing requirements to biopython.egg-info/requires.txt writing top-level names to biopython.egg-info/top_level.txt reading manifest file 'biopython.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.rst' writing manifest file 'biopython.egg-info/SOURCES.txt' copying Bio/cpairwise2module.c -> build/lib.linux-x86_64-3.9/Bio copying Bio/Align/_aligners.c -> build/lib.linux-x86_64-3.9/Bio/Align creating build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BENNER22 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BENNER6 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BENNER74 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM45 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM50 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM62 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM80 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/BLOSUM90 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/DAYHOFF -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/FENG -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/GENETIC -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/GONNET1992 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/HOXD70 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/JOHNSON -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/JONES -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/LEVIN -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/MCLACHLAN -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/MDM78 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/NUC.4.4 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/PAM250 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/PAM30 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/PAM70 -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/RAO -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/RISLER -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/SCHNEIDER -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/STR -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Align/substitution_matrices/data/TRANS -> build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data copying Bio/Cluster/cluster.c -> build/lib.linux-x86_64-3.9/Bio/Cluster copying Bio/Cluster/cluster.h -> build/lib.linux-x86_64-3.9/Bio/Cluster copying Bio/Cluster/clustermodule.c -> build/lib.linux-x86_64-3.9/Bio/Cluster creating build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/EMBL_General.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/GenBank_General.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/HomoloGene.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_General.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PCSubstance.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Project.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Protein.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Pub.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_PubMed.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_ScoreMat.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqCode.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_SeqTable.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seq_split.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqalign.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqfeat.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqloc.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Submit.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Systems.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TSeq.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NCBI_all.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/NSE.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/OMSSA.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PDB_General.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PIR_General.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/PRF_General.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/SP_General.mod.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/XHTMLtablesetup.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivearticle.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-classes.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-mixes.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-models.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/archivecustom-modules.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/articlemeta.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/backmatter.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_100301.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_110101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_120101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_130101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_140101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/bookdoc_150101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/chars.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/common.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-classes.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/default-mixes.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/display.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eInfo_020511.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_090910.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eLink_101123.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/ePost_020511.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSearch_020511.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSpell.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/eSummary_041029.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/egquery.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/einfo.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/elink_020122.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esearch.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/esummary-v1.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/format.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/htmltable.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsa.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsb.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsc.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsn.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamso.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isoamsr.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isobox.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr1.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isocyr2.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isodia.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk1.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk2.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk3.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isogrk4.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat1.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isolat2.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomfrk.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomopf.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isomscr.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isonum.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isopub.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/isotech.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/journalmeta.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/link.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/list.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/math.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml-in-pubmed.mod -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2-qname-1.mod -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml2.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3-qname1.mod -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathml3.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mathmlsetup.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlalias.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/mmlextra.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/modules.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_011101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmcommon_090101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_011101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedline_090101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmserials_100101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/notat.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/para.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/phrase.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pmc-1.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_020114.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_080101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_090101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_100301.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_110101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_120101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_130501.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_140101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_150101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_180601.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/pubmed_190101.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/references.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/section.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/taxon.dtd -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs copying Bio/Entrez/DTDs/xmlspecchars.ent -> build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs creating build/lib.linux-x86_64-3.9/Bio/Entrez/XSDs copying Bio/Entrez/XSDs/IPGReportSet.xsd -> build/lib.linux-x86_64-3.9/Bio/Entrez/XSDs copying Bio/motifs/_pwm.c -> build/lib.linux-x86_64-3.9/Bio/motifs copying Bio/Nexus/cnexus.c -> build/lib.linux-x86_64-3.9/Bio/Nexus copying Bio/PDB/kdtrees.c -> build/lib.linux-x86_64-3.9/Bio/PDB copying Bio/PDB/QCPSuperimposer/qcprotmodule.c -> build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer running build_ext building 'Bio.Align._aligners' extension creating build/temp.linux-x86_64-3.9 creating build/temp.linux-x86_64-3.9/Bio creating build/temp.linux-x86_64-3.9/Bio/Align gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/Align/_aligners.c -o build/temp.linux-x86_64-3.9/Bio/Align/_aligners.o gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/Align/_aligners.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/Align/_aligners.cpython-39-x86_64-linux-gnu.so building 'Bio.cpairwise2' extension gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/cpairwise2module.c -o build/temp.linux-x86_64-3.9/Bio/cpairwise2module.o gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/cpairwise2module.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/cpairwise2.cpython-39-x86_64-linux-gnu.so building 'Bio.Nexus.cnexus' extension creating build/temp.linux-x86_64-3.9/Bio/Nexus gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/Nexus/cnexus.c -o build/temp.linux-x86_64-3.9/Bio/Nexus/cnexus.o gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/Nexus/cnexus.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/Nexus/cnexus.cpython-39-x86_64-linux-gnu.so building 'Bio.PDB.QCPSuperimposer.qcprotmodule' extension creating build/temp.linux-x86_64-3.9/Bio/PDB creating build/temp.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/PDB/QCPSuperimposer/qcprotmodule.c -o build/temp.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer/qcprotmodule.o gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer/qcprotmodule.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-39-x86_64-linux-gnu.so building 'Bio.motifs._pwm' extension creating build/temp.linux-x86_64-3.9/Bio/motifs gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/motifs/_pwm.c -o build/temp.linux-x86_64-3.9/Bio/motifs/_pwm.o gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/motifs/_pwm.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/motifs/_pwm.cpython-39-x86_64-linux-gnu.so building 'Bio.Cluster._cluster' extension creating build/temp.linux-x86_64-3.9/Bio/Cluster gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/Cluster/cluster.c -o build/temp.linux-x86_64-3.9/Bio/Cluster/cluster.o gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/Cluster/clustermodule.c -o build/temp.linux-x86_64-3.9/Bio/Cluster/clustermodule.o gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/Cluster/cluster.o build/temp.linux-x86_64-3.9/Bio/Cluster/clustermodule.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/Cluster/_cluster.cpython-39-x86_64-linux-gnu.so building 'Bio.PDB.kdtrees' extension gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I/usr/include/python3.9 -c Bio/PDB/kdtrees.c -o build/temp.linux-x86_64-3.9/Bio/PDB/kdtrees.o gcc -pthread -shared build/temp.linux-x86_64-3.9/Bio/PDB/kdtrees.o -L/usr/lib64 -o build/lib.linux-x86_64-3.9/Bio/PDB/kdtrees.cpython-39-x86_64-linux-gnu.so running install_lib creating /usr/src/slapt-src/academic/biopython/package-biopython/usr creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64 creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9 creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/_utils.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/kNN.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/bgzf.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/pairwise2.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/SeqFeature.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/MarkovModel.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/File.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/MaxEntropy.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/LogisticRegression.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/SeqRecord.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/Seq.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/NaiveBayes.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Affy copying build/lib.linux-x86_64-3.9/Bio/Affy/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Affy copying build/lib.linux-x86_64-3.9/Bio/Affy/CelFile.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Affy creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align copying build/lib.linux-x86_64-3.9/Bio/Align/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align copying build/lib.linux-x86_64-3.9/Bio/Align/AlignInfo.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Mafft.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Dialign.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_MSAProbs.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Clustalw.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Muscle.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_ClustalOmega.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_TCoffee.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Probcons.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications copying build/lib.linux-x86_64-3.9/Bio/Align/Applications/_Prank.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BENNER22 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BENNER6 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BENNER74 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BLOSUM45 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BLOSUM50 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BLOSUM62 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BLOSUM80 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/BLOSUM90 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/DAYHOFF -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/FENG -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/GENETIC -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/GONNET1992 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/HOXD70 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/JOHNSON -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/JONES -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/LEVIN -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/MCLACHLAN -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/MDM78 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/NUC.4.4 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/PAM250 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/PAM30 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/PAM70 -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/RAO -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/RISLER -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/SCHNEIDER -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/STR -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/substitution_matrices/data/TRANS -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/data copying build/lib.linux-x86_64-3.9/Bio/Align/_aligners.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align copying build/lib.linux-x86_64-3.9/Bio/Align/_aligners.cpython-39-x86_64-linux-gnu.so -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/NexusIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/ClustalIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/PhylipIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/EmbossIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/FastaIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/MauveIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/StockholmIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/MsfIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/Interfaces.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO copying build/lib.linux-x86_64-3.9/Bio/AlignIO/MafIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Alphabet copying build/lib.linux-x86_64-3.9/Bio/Alphabet/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Alphabet creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Application copying build/lib.linux-x86_64-3.9/Bio/Application/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Application creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast copying build/lib.linux-x86_64-3.9/Bio/Blast/Record.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast copying build/lib.linux-x86_64-3.9/Bio/Blast/NCBIWWW.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast copying build/lib.linux-x86_64-3.9/Bio/Blast/NCBIXML.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast copying build/lib.linux-x86_64-3.9/Bio/Blast/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast copying build/lib.linux-x86_64-3.9/Bio/Blast/Applications.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast copying build/lib.linux-x86_64-3.9/Bio/Blast/ParseBlastTable.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/CAPS copying build/lib.linux-x86_64-3.9/Bio/CAPS/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/CAPS creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster copying build/lib.linux-x86_64-3.9/Bio/Cluster/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster copying build/lib.linux-x86_64-3.9/Bio/Cluster/cluster.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster copying build/lib.linux-x86_64-3.9/Bio/Cluster/cluster.h -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster copying build/lib.linux-x86_64-3.9/Bio/Cluster/clustermodule.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster copying build/lib.linux-x86_64-3.9/Bio/Cluster/_cluster.cpython-39-x86_64-linux-gnu.so -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign copying build/lib.linux-x86_64-3.9/Bio/codonalign/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign copying build/lib.linux-x86_64-3.9/Bio/codonalign/codonalignment.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign copying build/lib.linux-x86_64-3.9/Bio/codonalign/codonseq.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign copying build/lib.linux-x86_64-3.9/Bio/codonalign/chisq.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Compass copying build/lib.linux-x86_64-3.9/Bio/Compass/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Compass creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Crystal copying build/lib.linux-x86_64-3.9/Bio/Crystal/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Crystal creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data copying build/lib.linux-x86_64-3.9/Bio/Data/CodonTable.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data copying build/lib.linux-x86_64-3.9/Bio/Data/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data copying build/lib.linux-x86_64-3.9/Bio/Data/IUPACData.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data copying build/lib.linux-x86_64-3.9/Bio/Data/SCOPData.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss copying build/lib.linux-x86_64-3.9/Bio/Emboss/Primer3.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss copying build/lib.linux-x86_64-3.9/Bio/Emboss/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss copying build/lib.linux-x86_64-3.9/Bio/Emboss/Applications.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss copying build/lib.linux-x86_64-3.9/Bio/Emboss/PrimerSearch.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez copying build/lib.linux-x86_64-3.9/Bio/Entrez/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez copying build/lib.linux-x86_64-3.9/Bio/Entrez/Parser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/Docsum_3_0.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/Docsum_3_0.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/Docsum_3_1.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/Docsum_3_1.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/Docsum_3_2.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/Docsum_3_2.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/Docsum_3_3.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/Docsum_3_3.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/Docsum_3_4.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/Docsum_3_4.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/EMBL_General.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/EMBL_General.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/GenBank_General.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/GenBank_General.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/HomoloGene.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/HomoloGene.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/INSD_INSDSeq.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/INSD_INSDSeq.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/MMDB.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/MMDB.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/MMDB_Chemical_graph.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/MMDB_Chemical_graph.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/MMDB_Features.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/MMDB_Features.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/MMDB_Structural_model.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/MMDB_Structural_model.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Access.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Access.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Biblio.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Biblio.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_BioSource.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_BioSource.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_BioTree.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_BioTree.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Blast4.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Blast4.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_BlastDL.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_BlastDL.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_BlastOutput.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_BlastOutput.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Cdd.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Cdd.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Cn3d.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Cn3d.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Entity.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Entrez2.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Entrez2.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Entrezgene.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Entrezgene.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_FeatDef.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_FeatDef.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_GBSeq.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_GBSeq.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Gene.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Gene.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_General.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_General.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_ID1Access.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_ID1Access.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_ID2Access.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_ID2Access.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_MedArchive.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_MedArchive.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Medlars.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Medlars.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Medline.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Medline.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Mim.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Mim.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Mime.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Mime.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_ObjPrt.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_ObjPrt.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Organism.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Organism.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_PCAssay.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_PCAssay.mod.dtd -> 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build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_RNA.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_RNA.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Remap.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Remap.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Rsite.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Rsite.mod.dtd -> 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copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Seqres.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Seqset.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Seqset.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Sequence.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Sequence.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Submit.dtd -> 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build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_TxInit.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Variation.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_Variation.mod.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NCBI_all.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NSE.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/NSE.mod.dtd -> 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copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/bookdoc_130101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/bookdoc_140101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/bookdoc_150101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/chars.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/common.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/default-classes.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/default-mixes.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/display.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/eInfo_020511.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/eLink_090910.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/eLink_101123.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/ePost_020511.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/eSearch_020511.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/eSpell.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/eSummary_041029.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/egquery.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/einfo.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/elink_020122.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/esearch.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/esummary-v1.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/format.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/htmltable.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isoamsa.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isoamsb.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isoamsc.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isoamsn.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isoamso.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isoamsr.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isobox.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isocyr1.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isocyr2.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isodia.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isogrk1.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isogrk2.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isogrk3.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isogrk4.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isolat1.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isolat2.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isomfrk.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isomopf.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isomscr.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isonum.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isopub.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/isotech.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/journalmeta.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/link.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/list.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/math.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/mathml-in-pubmed.mod -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/mathml2-qname-1.mod -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/mathml2.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/mathml3-qname1.mod -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/mathml3.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/mathmlsetup.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/mmlalias.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/mmlextra.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/modules.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlm-articleset-2.0.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmcatalogrecordset_170601.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmcommon_011101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmcommon_080101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmcommon_090101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedline_011101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedline_080101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedline_090101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitation_011101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitation_080101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitation_090101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitationset_100101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitationset_100301.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitationset_110101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitationset_120101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitationset_130101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitationset_130501.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitationset_140101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmmedlinecitationset_150101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmserials_080101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmserials_100101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmsharedcatcit_080101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/nlmsharedcatcit_090101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/notat.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/para.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/phrase.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pmc-1.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_020114.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_080101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_090101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_100101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_100301.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_110101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_120101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_130101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_130501.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_140101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_150101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_180101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_180601.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/pubmed_190101.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/references.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/section.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/taxon.dtd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/DTDs/xmlspecchars.ent -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/DTDs creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/XSDs copying build/lib.linux-x86_64-3.9/Bio/Entrez/XSDs/IPGReportSet.xsd -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/XSDs creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-3.9/Bio/ExPASy/Prosite.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-3.9/Bio/ExPASy/ScanProsite.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-3.9/Bio/ExPASy/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-3.9/Bio/ExPASy/Enzyme.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-3.9/Bio/ExPASy/Prodoc.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy copying build/lib.linux-x86_64-3.9/Bio/ExPASy/cellosaurus.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP copying build/lib.linux-x86_64-3.9/Bio/FSSP/fssp_rec.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP copying build/lib.linux-x86_64-3.9/Bio/FSSP/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP copying build/lib.linux-x86_64-3.9/Bio/FSSP/FSSPTools.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank copying build/lib.linux-x86_64-3.9/Bio/GenBank/Record.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank copying build/lib.linux-x86_64-3.9/Bio/GenBank/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank copying build/lib.linux-x86_64-3.9/Bio/GenBank/Scanner.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank copying build/lib.linux-x86_64-3.9/Bio/GenBank/utils.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Geo copying build/lib.linux-x86_64-3.9/Bio/Geo/Record.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Geo copying build/lib.linux-x86_64-3.9/Bio/Geo/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Geo creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics copying build/lib.linux-x86_64-3.9/Bio/Graphics/BasicChromosome.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics copying build/lib.linux-x86_64-3.9/Bio/Graphics/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics copying build/lib.linux-x86_64-3.9/Bio/Graphics/KGML_vis.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics copying build/lib.linux-x86_64-3.9/Bio/Graphics/DisplayRepresentation.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics copying build/lib.linux-x86_64-3.9/Bio/Graphics/ColorSpiral.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics copying build/lib.linux-x86_64-3.9/Bio/Graphics/Distribution.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics copying build/lib.linux-x86_64-3.9/Bio/Graphics/Comparative.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_CircularDrawer.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_FeatureSet.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_LinearDrawer.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_Graph.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_Colors.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_Track.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_Diagram.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_CrossLink.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_Feature.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram copying build/lib.linux-x86_64-3.9/Bio/Graphics/GenomeDiagram/_GraphSet.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM copying build/lib.linux-x86_64-3.9/Bio/HMM/DynamicProgramming.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM copying build/lib.linux-x86_64-3.9/Bio/HMM/Utilities.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM copying build/lib.linux-x86_64-3.9/Bio/HMM/Trainer.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM copying build/lib.linux-x86_64-3.9/Bio/HMM/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM copying build/lib.linux-x86_64-3.9/Bio/HMM/MarkovModel.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG copying build/lib.linux-x86_64-3.9/Bio/KEGG/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG copying build/lib.linux-x86_64-3.9/Bio/KEGG/REST.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Compound copying build/lib.linux-x86_64-3.9/Bio/KEGG/Compound/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Compound creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Enzyme copying build/lib.linux-x86_64-3.9/Bio/KEGG/Enzyme/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Enzyme creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Gene copying build/lib.linux-x86_64-3.9/Bio/KEGG/Gene/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Gene creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Map copying build/lib.linux-x86_64-3.9/Bio/KEGG/Map/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Map creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/KGML copying build/lib.linux-x86_64-3.9/Bio/KEGG/KGML/KGML_pathway.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/KGML copying build/lib.linux-x86_64-3.9/Bio/KEGG/KGML/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/KGML copying build/lib.linux-x86_64-3.9/Bio/KEGG/KGML/KGML_parser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/KGML creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf copying build/lib.linux-x86_64-3.9/Bio/PDB/mmtf/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf copying build/lib.linux-x86_64-3.9/Bio/PDB/mmtf/mmtfio.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf copying build/lib.linux-x86_64-3.9/Bio/PDB/mmtf/DefaultParser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf copying build/lib.linux-x86_64-3.9/Bio/PDB/PDBList.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/HSExposure.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/NeighborSearch.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/vectors.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/PDBParser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/Selection.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/Dice.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/FragmentMapper.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/Polypeptide.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/Structure.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/AbstractPropertyMap.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/ic_data.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/Entity.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/DSSP.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/ResidueDepth.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/PICIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/Model.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/internal_coords.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/Chain.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/parse_pdb_header.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/PDBIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/ic_rebuild.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/StructureBuilder.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/PSEA.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/Residue.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/StructureAlignment.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/MMCIFParser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/NACCESS.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/MMCIF2Dict.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/Superimposer.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/SCADIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/PDBExceptions.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/Atom.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/mmcifio.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer/qcprotmodule.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.linux-x86_64-3.9/Bio/PDB/QCPSuperimposer/qcprotmodule.cpython-39-x86_64-linux-gnu.so -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/QCPSuperimposer copying build/lib.linux-x86_64-3.9/Bio/PDB/kdtrees.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB copying build/lib.linux-x86_64-3.9/Bio/PDB/kdtrees.cpython-39-x86_64-linux-gnu.so -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Medline copying build/lib.linux-x86_64-3.9/Bio/Medline/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Medline creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/clusterbuster.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/pfm.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/transfac.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/minimal.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/meme.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/thresholds.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/xms.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/mast.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/matrix.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/alignace.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/applications copying build/lib.linux-x86_64-3.9/Bio/motifs/applications/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/applications copying build/lib.linux-x86_64-3.9/Bio/motifs/applications/_xxmotif.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/applications creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/jaspar copying build/lib.linux-x86_64-3.9/Bio/motifs/jaspar/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/jaspar copying build/lib.linux-x86_64-3.9/Bio/motifs/jaspar/db.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/jaspar copying build/lib.linux-x86_64-3.9/Bio/motifs/_pwm.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs copying build/lib.linux-x86_64-3.9/Bio/motifs/_pwm.cpython-39-x86_64-linux-gnu.so -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus copying build/lib.linux-x86_64-3.9/Bio/Nexus/StandardData.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus copying build/lib.linux-x86_64-3.9/Bio/Nexus/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus copying build/lib.linux-x86_64-3.9/Bio/Nexus/Nexus.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus copying build/lib.linux-x86_64-3.9/Bio/Nexus/Trees.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus copying build/lib.linux-x86_64-3.9/Bio/Nexus/Nodes.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus copying build/lib.linux-x86_64-3.9/Bio/Nexus/cnexus.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus copying build/lib.linux-x86_64-3.9/Bio/Nexus/cnexus.cpython-39-x86_64-linux-gnu.so -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/NMR copying build/lib.linux-x86_64-3.9/Bio/NMR/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/NMR copying build/lib.linux-x86_64-3.9/Bio/NMR/xpktools.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/NMR copying build/lib.linux-x86_64-3.9/Bio/NMR/NOEtools.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/NMR creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway copying build/lib.linux-x86_64-3.9/Bio/Pathway/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/Rep copying build/lib.linux-x86_64-3.9/Bio/Pathway/Rep/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/Rep copying build/lib.linux-x86_64-3.9/Bio/Pathway/Rep/MultiGraph.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/Rep copying build/lib.linux-x86_64-3.9/Bio/Pathway/Rep/Graph.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/Rep creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/phenotype copying build/lib.linux-x86_64-3.9/Bio/phenotype/phen_micro.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/phenotype copying build/lib.linux-x86_64-3.9/Bio/phenotype/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/phenotype copying build/lib.linux-x86_64-3.9/Bio/phenotype/pm_fitting.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/phenotype creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen copying build/lib.linux-x86_64-3.9/Bio/PopGen/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop/LargeFileParser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop/EasyController.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop/FileParser.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop copying build/lib.linux-x86_64-3.9/Bio/PopGen/GenePop/Controller.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction copying build/lib.linux-x86_64-3.9/Bio/Restriction/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction copying build/lib.linux-x86_64-3.9/Bio/Restriction/Restriction_Dictionary.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction copying build/lib.linux-x86_64-3.9/Bio/Restriction/PrintFormat.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction copying build/lib.linux-x86_64-3.9/Bio/Restriction/Restriction.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP copying build/lib.linux-x86_64-3.9/Bio/SCOP/Hie.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP copying build/lib.linux-x86_64-3.9/Bio/SCOP/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP copying build/lib.linux-x86_64-3.9/Bio/SCOP/Des.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP copying build/lib.linux-x86_64-3.9/Bio/SCOP/Raf.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP copying build/lib.linux-x86_64-3.9/Bio/SCOP/Dom.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP copying build/lib.linux-x86_64-3.9/Bio/SCOP/Residues.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP copying build/lib.linux-x86_64-3.9/Bio/SCOP/Cla.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_utils.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_index.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/FastaIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/BlatIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_legacy copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy/ParserSupport.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_legacy copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_legacy copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_legacy/NCBIStandalone.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_legacy creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_model/hit.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_model/query.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_model/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_model/_base.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model copying build/lib.linux-x86_64-3.9/Bio/SearchIO/_model/hsp.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO/blast_text.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO/blast_tab.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/BlastIO/blast_xml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HHsuiteIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/HHsuiteIO/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HHsuiteIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HHsuiteIO creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO/hmmer3_domtab.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO/hmmer3_tab.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO/hmmer2_text.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO/_base.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/HmmerIO/hmmer3_text.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO/exonerate_cigar.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO/_base.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/ExonerateIO/exonerate_text.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/InterproscanIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/InterproscanIO/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/InterproscanIO copying build/lib.linux-x86_64-3.9/Bio/SearchIO/InterproscanIO/interproscan_xml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/InterproscanIO creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/XdnaIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/SwissIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/AbiIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/GckIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/SffIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/PirIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/IgIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/UniprotIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/TabIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/NibIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/InsdcIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/QualityIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/_index.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/PdbIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/SeqXmlIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/AceIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/FastaIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/PhdIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/SnapGeneIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO copying build/lib.linux-x86_64-3.9/Bio/SeqIO/Interfaces.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/CodonUsage.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/CheckSum.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/ProtParamData.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/MeltingTemp.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/ProtParam.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/CodonUsageIndices.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/lcc.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils copying build/lib.linux-x86_64-3.9/Bio/SeqUtils/IsoelectricPoint.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Ace.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing copying build/lib.linux-x86_64-3.9/Bio/Sequencing/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Phd.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications/_Novoalign.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications/_samtools.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications copying build/lib.linux-x86_64-3.9/Bio/Sequencing/Applications/_bwa.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Statistics copying build/lib.linux-x86_64-3.9/Bio/Statistics/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Statistics copying build/lib.linux-x86_64-3.9/Bio/Statistics/lowess.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Statistics creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat copying build/lib.linux-x86_64-3.9/Bio/SubsMat/FreqTable.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat copying build/lib.linux-x86_64-3.9/Bio/SubsMat/MatrixInfo.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat copying build/lib.linux-x86_64-3.9/Bio/SubsMat/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SVDSuperimposer copying build/lib.linux-x86_64-3.9/Bio/SVDSuperimposer/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SVDSuperimposer creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SwissProt copying build/lib.linux-x86_64-3.9/Bio/SwissProt/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SwissProt copying build/lib.linux-x86_64-3.9/Bio/SwissProt/KeyWList.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SwissProt creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/TogoWS copying build/lib.linux-x86_64-3.9/Bio/TogoWS/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/TogoWS creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/_utils.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/NexusIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/Newick.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/BaseTree.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/NeXMLIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/NeXML.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/PhyloXMLIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/_io.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/CDAOIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/CDAO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/NewickIO.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/_cdao_owl.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/TreeConstruction.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/PhyloXML.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo copying build/lib.linux-x86_64-3.9/Bio/Phylo/Consensus.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-3.9/Bio/Phylo/Applications/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-3.9/Bio/Phylo/Applications/_Fasttree.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-3.9/Bio/Phylo/Applications/_Phyml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications copying build/lib.linux-x86_64-3.9/Bio/Phylo/Applications/_Raxml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-3.9/Bio/Phylo/PAML/yn00.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-3.9/Bio/Phylo/PAML/baseml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-3.9/Bio/Phylo/PAML/_parse_codeml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-3.9/Bio/Phylo/PAML/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-3.9/Bio/Phylo/PAML/_parse_yn00.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-3.9/Bio/Phylo/PAML/_paml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-3.9/Bio/Phylo/PAML/chi2.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-3.9/Bio/Phylo/PAML/codeml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML copying build/lib.linux-x86_64-3.9/Bio/Phylo/PAML/_parse_baseml.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/UniGene copying build/lib.linux-x86_64-3.9/Bio/UniGene/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/UniGene creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/UniProt copying build/lib.linux-x86_64-3.9/Bio/UniProt/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/UniProt copying build/lib.linux-x86_64-3.9/Bio/UniProt/GOA.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/UniProt creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Wise copying build/lib.linux-x86_64-3.9/Bio/Wise/dnal.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Wise copying build/lib.linux-x86_64-3.9/Bio/Wise/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Wise copying build/lib.linux-x86_64-3.9/Bio/Wise/psw.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Wise copying build/lib.linux-x86_64-3.9/Bio/cpairwise2module.c -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio copying build/lib.linux-x86_64-3.9/Bio/cpairwise2.cpython-39-x86_64-linux-gnu.so -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio creating /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL copying build/lib.linux-x86_64-3.9/BioSQL/DBUtils.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL copying build/lib.linux-x86_64-3.9/BioSQL/__init__.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL copying build/lib.linux-x86_64-3.9/BioSQL/Loader.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL copying build/lib.linux-x86_64-3.9/BioSQL/BioSeq.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL copying build/lib.linux-x86_64-3.9/BioSQL/BioSeqDatabase.py -> /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/_utils.py to _utils.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/kNN.py to kNN.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/bgzf.py to bgzf.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/pairwise2.py to pairwise2.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqFeature.py to SeqFeature.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/MarkovModel.py to MarkovModel.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/File.py to File.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/MaxEntropy.py to MaxEntropy.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/LogisticRegression.py to LogisticRegression.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqRecord.py to SeqRecord.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Seq.py to Seq.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/NaiveBayes.py to NaiveBayes.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Affy/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Affy/CelFile.py to CelFile.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/AlignInfo.py to AlignInfo.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications/_Mafft.py to _Mafft.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications/_Dialign.py to _Dialign.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications/_MSAProbs.py to _MSAProbs.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications/_Clustalw.py to _Clustalw.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications/_Muscle.py to _Muscle.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications/_ClustalOmega.py to _ClustalOmega.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications/_TCoffee.py to _TCoffee.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications/_Probcons.py to _Probcons.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/Applications/_Prank.py to _Prank.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Align/substitution_matrices/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/NexusIO.py to NexusIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/ClustalIO.py to ClustalIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/PhylipIO.py to PhylipIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/EmbossIO.py to EmbossIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/FastaIO.py to FastaIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/MauveIO.py to MauveIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/StockholmIO.py to StockholmIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/MsfIO.py to MsfIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/Interfaces.py to Interfaces.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/AlignIO/MafIO.py to MafIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Alphabet/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Application/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast/Record.py to Record.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast/NCBIWWW.py to NCBIWWW.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast/NCBIXML.py to NCBIXML.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast/Applications.py to Applications.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Blast/ParseBlastTable.py to ParseBlastTable.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/CAPS/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Cluster/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign/codonalignment.py to codonalignment.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign/codonseq.py to codonseq.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/codonalign/chisq.py to chisq.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Compass/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Crystal/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data/CodonTable.py to CodonTable.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data/IUPACData.py to IUPACData.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Data/SCOPData.py to SCOPData.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss/Primer3.py to Primer3.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss/Applications.py to Applications.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Emboss/PrimerSearch.py to PrimerSearch.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Entrez/Parser.py to Parser.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy/Prosite.py to Prosite.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy/ScanProsite.py to ScanProsite.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy/Enzyme.py to Enzyme.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy/Prodoc.py to Prodoc.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/ExPASy/cellosaurus.py to cellosaurus.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP/fssp_rec.py to fssp_rec.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/FSSP/FSSPTools.py to FSSPTools.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank/Record.py to Record.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank/Scanner.py to Scanner.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/GenBank/utils.py to utils.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Geo/Record.py to Record.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Geo/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/BasicChromosome.py to BasicChromosome.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/KGML_vis.py to KGML_vis.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/DisplayRepresentation.py to DisplayRepresentation.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/ColorSpiral.py to ColorSpiral.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/Distribution.py to Distribution.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/Comparative.py to Comparative.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_CircularDrawer.py to _CircularDrawer.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_FeatureSet.py to _FeatureSet.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_LinearDrawer.py to _LinearDrawer.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_AbstractDrawer.py to _AbstractDrawer.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_Graph.py to _Graph.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_Colors.py to _Colors.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_Track.py to _Track.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_Diagram.py to _Diagram.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_CrossLink.py to _CrossLink.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_Feature.py to _Feature.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Graphics/GenomeDiagram/_GraphSet.py to _GraphSet.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM/DynamicProgramming.py to DynamicProgramming.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM/Utilities.py to Utilities.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM/Trainer.py to Trainer.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/HMM/MarkovModel.py to MarkovModel.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/REST.py to REST.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Compound/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Enzyme/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Gene/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/Map/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/KGML/KGML_pathway.py to KGML_pathway.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/KGML/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/KEGG/KGML/KGML_parser.py to KGML_parser.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf/mmtfio.py to mmtfio.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmtf/DefaultParser.py to DefaultParser.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/PDBList.py to PDBList.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/HSExposure.py to HSExposure.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/NeighborSearch.py to NeighborSearch.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/vectors.py to vectors.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/PDBParser.py to PDBParser.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/Selection.py to Selection.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/Dice.py to Dice.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/FragmentMapper.py to FragmentMapper.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/Polypeptide.py to Polypeptide.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/Structure.py to Structure.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/AbstractPropertyMap.py to AbstractPropertyMap.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/ic_data.py to ic_data.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/Entity.py to Entity.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/DSSP.py to DSSP.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/ResidueDepth.py to ResidueDepth.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/PICIO.py to PICIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/Model.py to Model.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/internal_coords.py to internal_coords.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/Chain.py to Chain.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/parse_pdb_header.py to parse_pdb_header.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/PDBIO.py to PDBIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/ic_rebuild.py to ic_rebuild.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/StructureBuilder.py to StructureBuilder.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/PSEA.py to PSEA.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/Residue.py to Residue.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/StructureAlignment.py to StructureAlignment.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/MMCIFParser.py to MMCIFParser.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/NACCESS.py to NACCESS.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/MMCIF2Dict.py to MMCIF2Dict.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/Superimposer.py to Superimposer.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/SCADIO.py to SCADIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/PDBExceptions.py to PDBExceptions.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/Atom.py to Atom.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/mmcifio.py to mmcifio.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PDB/QCPSuperimposer/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Medline/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/clusterbuster.py to clusterbuster.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/pfm.py to pfm.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/transfac.py to transfac.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/minimal.py to minimal.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/meme.py to meme.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/thresholds.py to thresholds.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/xms.py to xms.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/mast.py to mast.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/matrix.py to matrix.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/alignace.py to alignace.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/applications/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/applications/_xxmotif.py to _xxmotif.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/jaspar/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/motifs/jaspar/db.py to db.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus/StandardData.py to StandardData.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus/Nexus.py to Nexus.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus/Trees.py to Trees.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Nexus/Nodes.py to Nodes.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/NMR/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/NMR/xpktools.py to xpktools.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/NMR/NOEtools.py to NOEtools.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/Rep/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/Rep/MultiGraph.py to MultiGraph.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Pathway/Rep/Graph.py to Graph.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/phenotype/phen_micro.py to phen_micro.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/phenotype/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/phenotype/pm_fitting.py to pm_fitting.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop/LargeFileParser.py to LargeFileParser.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop/EasyController.py to EasyController.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop/FileParser.py to FileParser.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/PopGen/GenePop/Controller.py to Controller.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction/Restriction_Dictionary.py to Restriction_Dictionary.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction/PrintFormat.py to PrintFormat.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Restriction/Restriction.py to Restriction.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP/Hie.py to Hie.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP/Des.py to Des.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP/Raf.py to Raf.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP/Dom.py to Dom.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP/Residues.py to Residues.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SCOP/Cla.py to Cla.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_utils.py to _utils.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_index.py to _index.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/FastaIO.py to FastaIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlatIO.py to BlatIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_legacy/ParserSupport.py to ParserSupport.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_legacy/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_legacy/NCBIStandalone.py to NCBIStandalone.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model/hit.py to hit.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model/query.py to query.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model/_base.py to _base.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/_model/hsp.py to hsp.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO/blast_text.py to blast_text.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO/blast_tab.py to blast_tab.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/BlastIO/blast_xml.py to blast_xml.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HHsuiteIO/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HHsuiteIO/hhsuite2_text.py to hhsuite2_text.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO/hmmer3_domtab.py to hmmer3_domtab.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO/hmmer3_tab.py to hmmer3_tab.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO/hmmer2_text.py to hmmer2_text.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO/_base.py to _base.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/HmmerIO/hmmer3_text.py to hmmer3_text.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO/exonerate_vulgar.py to exonerate_vulgar.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO/exonerate_cigar.py to exonerate_cigar.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO/_base.py to _base.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/ExonerateIO/exonerate_text.py to exonerate_text.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/InterproscanIO/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SearchIO/InterproscanIO/interproscan_xml.py to interproscan_xml.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/XdnaIO.py to XdnaIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/SwissIO.py to SwissIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/AbiIO.py to AbiIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/GckIO.py to GckIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/SffIO.py to SffIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/PirIO.py to PirIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/IgIO.py to IgIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/UniprotIO.py to UniprotIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/TabIO.py to TabIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/NibIO.py to NibIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/InsdcIO.py to InsdcIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/QualityIO.py to QualityIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/_index.py to _index.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/PdbIO.py to PdbIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/SeqXmlIO.py to SeqXmlIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/AceIO.py to AceIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/FastaIO.py to FastaIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/PhdIO.py to PhdIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/SnapGeneIO.py to SnapGeneIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqIO/Interfaces.py to Interfaces.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils/CodonUsage.py to CodonUsage.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils/CheckSum.py to CheckSum.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils/ProtParamData.py to ProtParamData.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils/MeltingTemp.py to MeltingTemp.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils/ProtParam.py to ProtParam.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils/CodonUsageIndices.py to CodonUsageIndices.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils/lcc.py to lcc.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SeqUtils/IsoelectricPoint.py to IsoelectricPoint.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Ace.py to Ace.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Phd.py to Phd.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications/_Novoalign.py to _Novoalign.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications/_samtools.py to _samtools.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Sequencing/Applications/_bwa.py to _bwa.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Statistics/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Statistics/lowess.py to lowess.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat/FreqTable.py to FreqTable.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat/MatrixInfo.py to MatrixInfo.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SubsMat/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SVDSuperimposer/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SwissProt/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/SwissProt/KeyWList.py to KeyWList.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/TogoWS/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/_utils.py to _utils.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/NexusIO.py to NexusIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Newick.py to Newick.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/BaseTree.py to BaseTree.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/NeXMLIO.py to NeXMLIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/NeXML.py to NeXML.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PhyloXMLIO.py to PhyloXMLIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/_io.py to _io.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/CDAOIO.py to CDAOIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/CDAO.py to CDAO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/NewickIO.py to NewickIO.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/_cdao_owl.py to _cdao_owl.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/TreeConstruction.py to TreeConstruction.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PhyloXML.py to PhyloXML.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Consensus.py to Consensus.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications/_Fasttree.py to _Fasttree.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications/_Phyml.py to _Phyml.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/Applications/_Raxml.py to _Raxml.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML/yn00.py to yn00.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML/baseml.py to baseml.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML/_parse_codeml.py to _parse_codeml.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML/_parse_yn00.py to _parse_yn00.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML/_paml.py to _paml.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML/chi2.py to chi2.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML/codeml.py to codeml.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Phylo/PAML/_parse_baseml.py to _parse_baseml.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/UniGene/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/UniProt/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/UniProt/GOA.py to GOA.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Wise/dnal.py to dnal.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Wise/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/Bio/Wise/psw.py to psw.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL/DBUtils.py to DBUtils.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL/__init__.py to __init__.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL/Loader.py to Loader.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL/BioSeq.py to BioSeq.cpython-39.pyc byte-compiling /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/BioSQL/BioSeqDatabase.py to BioSeqDatabase.cpython-39.pyc running install_egg_info Copying biopython.egg-info to /usr/src/slapt-src/academic/biopython/package-biopython/usr/lib64/python3.9/site-packages/biopython-1.78-py3.9.egg-info running install_scripts Slackware package maker, version 3.14159265. Searching for symbolic links: No symbolic links were found, so we won't make an installation script. You can make your own later in ./install/doinst.sh and rebuild the package if you like. This next step is optional - you can set the directories in your package to some sane permissions. If any of the directories in your package have special permissions, then DO NOT reset them here! Would you like to reset all directory permissions to 755 (drwxr-xr-x) and directory ownerships to root.root ([y]es, [n]o)? n Creating Slackware package: /usr/src/slapt-src/academic/biopython/biopython-1.78-x86_64-1salix15.0.txz Slackware package /usr/src/slapt-src/academic/biopython/biopython-1.78-x86_64-1salix15.0.txz created. Installing package biopython-1.78-x86_64-1salix15.0... | biopython (A set of Python tools for biological computation) | | Biopython is a set of freely available tools for biological | computation written in Python. Biopython features include parsers | for various Bioinformatics file formats (BLAST, Clustalw, FASTA, | Genbank), access to online services (NCBI, Expasy), interfaces to | common and not-so-common programs (Clustalw, DSSP, MSMS), a | standard sequence class, various clustering modules, a KD tree | data structure etc. and even documentation. | | https://biopython.org/ | |