./ etc/ etc/profile.d/ etc/profile.d/novocraft.csh.new etc/profile.d/novocraft.sh.new install/ install/doinst.sh install/slack-desc opt/ opt/novocraft/ opt/novocraft/IONTorrent.R opt/novocraft/installpackages.R opt/novocraft/isnovoindex opt/novocraft/novo2paf opt/novocraft/novo2sam.pl opt/novocraft/novoalign opt/novocraft/novoalignCS opt/novocraft/novobarcode opt/novocraft/novoindex opt/novocraft/novolrcleaver opt/novocraft/novolrcorrector opt/novocraft/novolrpolish opt/novocraft/novomethyl opt/novocraft/novope2bed.pl opt/novocraft/novorun.pl opt/novocraft/novosort opt/novocraft/novoutil opt/novocraft/qcalplot.R opt/novocraft/rrbsreference usr/ usr/doc/ usr/doc/novocraft-3.09.03/ usr/doc/novocraft-3.09.03/NovoBarcode.pdf usr/doc/novocraft-3.09.03/NovoLR_Guide.pdf usr/doc/novocraft-3.09.03/Novoalign-BWAMEMAlternateScaffoldMappings.pdf usr/doc/novocraft-3.09.03/NovoalignCS_Quick_Start.pdf usr/doc/novocraft-3.09.03/NovoalignReferenceManualV3.09.pdf usr/doc/novocraft-3.09.03/NovoalignV3ReleaseNotice.pdf usr/doc/novocraft-3.09.03/Novoalign_Tuning_NextSeq.pdf usr/doc/novocraft-3.09.03/Novosort.pdf usr/doc/novocraft-3.09.03/novocraft.SlackBuild usr/doc/novocraft-3.09.03/readme.txt usr/doc/novocraft-3.09.03/readme_novomethyl.txt r.h novocraft/installpackages.R novocraft/IONTorrent.R novocraft/isnovoindex novocraft/novo2maq/ novocraft/novo2maq/AUTHORS novocraft/novo2maq/COPYING novocraft/novo2maq/Makefile novocraft/novo2maq/README novocraft/novo2maq/algo.hh novocraft/novo2maq/const.c novocraft/novo2maq/const.h novocraft/novo2maq/main.c novocraft/novo2maq/main.h novocraft/novo2maq/maqmap.c novocraft/novo2maq/maqmap.h novocraft/novo2maq/novo2maq.cc novocraft/novo2maq/stdhash.hh novocraft/novo2maq/novo2maq novocraft/novo2paf novocraft/novo2sam.pl novocraft/novoalign novocraft/Novoalign-BWAMEMAlternateScaffoldMappings.pdf novocraft/novoalignCS novocraft/novoalignCSMPI novocraft/NovoalignCS_Quick_Start.pdf novocraft/novoalignMPI novocraft/NovoalignMPI_User_Guide.pdf novocraft/NovoalignReferenceManualV3.09.pdf novocraft/Novoalign_Tuning_NextSeq.pdf novocraft/NovoalignV3ReleaseNotice.pdf novocraft/novobarcode novocraft/NovoBarcode.pdf novocraft/novoindex novocraft/novolrcleaver novocraft/novolrcorrector novocraft/NovoLR_Guide.pdf novocraft/novolrpolish novocraft/novomethyl novocraft/novope2bed.pl novocraft/novorun.pl novocraft/novosort novocraft/Novosort.pdf novocraft/novoutil novocraft/qcalplot.R novocraft/readme_novomethyl.txt novocraft/readme.txt novocraft/rrbsreference Slackware package maker, version 3.14159265. Searching for symbolic links: No symbolic links were found, so we won't make an installation script. You can make your own later in ./install/doinst.sh and rebuild the package if you like. This next step is optional - you can set the directories in your package to some sane permissions. If any of the directories in your package have special permissions, then DO NOT reset them here! Would you like to reset all directory permissions to 755 (drwxr-xr-x) and directory ownerships to root.root ([y]es, [n]o)? n Creating Slackware package: /usr/src/slapt-src/academic/novocraft/novocraft-3.09.03-x86_64-1salix15.0.txz Slackware package /usr/src/slapt-src/academic/novocraft/novocraft-3.09.03-x86_64-1salix15.0.txz created. Installing package novocraft-3.09.03-x86_64-1salix15.0... | novocraft (map short reads onto reference genome) | | The novocraft suit of programs contains tools like novoindex and | novoalign designed for mapping of short reads onto a reference | genome from Illumina, Ion Torrent, and 454 NGS platforms. | | This is a repackaging of the binaries made available by Novocraft | that do not need a license. | | http://www.novocraft.com/products/novoalign/ | | |