The following packages will be installed: treebest-ensembl Fetching README... 0%100%100%100%100%100%Done Fetching doinst.sh... 0%100%100%100%100%100%Done Fetching slack-desc... 0%100%100%100%100%100%Done Fetching treebest-ensembl.SlackBuild... 0%100%100%100%100%100%Done Fetching treebest-ensembl.info... 0%100%100%100%100%100%Done Fetching treebest.desktop... 0%100%100%100%100%100%Done Fetching treebest.png... 0%100%100%100%100%100%Done treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/ treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/ACKNOWLEDGEMENTS treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/AUTHORS treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/COPYING treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/ChangeLog treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/FUTURES treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/INSTALL treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/Makefile treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/Makefile.mac 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treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/treebest.texi treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/trimpoor.cc treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/utils.h treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/utils1.c treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/utils2.c make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290' flex parser.l bison --yacc -d parser.y gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer lex.yy.c -o lex.yy.o lex.yy.c:1191:16: warning: ‘input’ defined but not used [-Wunused-function] 1191 | #else | ^ lex.yy.c:1148:17: warning: ‘yyunput’ defined but not used [-Wunused-function] 1148 | | ^ ln -sf y.tab.c y.tab.cc g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer y.tab.cc -o y.tab.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. read.c -o read.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. nj.c -o nj.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. utils1.c -o utils1.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. subtree.c -o subtree.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. sdi.c -o sdi.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. bs_nj.c -o bs_nj.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. reroot.c -o reroot.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. task.c -o task.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. output.c -o output.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. ortho.c -o ortho.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. cut_tree.c -o cut_tree.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. spec.c -o spec.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. utils2.c -o utils2.o utils2.c: In function ‘tr_root_by_sdi’: utils2.c:162:13: warning: variable ‘m’ set but not used [-Wunused-but-set-variable] 162 | int m, i, min, min_i, min_dup; | ^ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. align.c -o align.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. filter.c -o filter.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. aln_mask.c -o aln_mask.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. prob_dist.c -o prob_dist.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. brent.c -o brent.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. make_ng86.c -o make_ng86.o make_ng86.c: In function ‘calc_ds’: make_ng86.c:130:26: warning: variable ‘nd_total’ set but not used [-Wunused-but-set-variable] 130 | double sd_total, nd_total; | ^~~~~~~~ make_ng86.c:130:16: warning: variable ‘sd_total’ set but not used [-Wunused-but-set-variable] 130 | double sd_total, nd_total; | ^~~~~~~~ make_ng86.c:124:29: warning: unused parameter ‘length’ [-Wunused-parameter] 124 | struct dsresult calc_ds(int length, int seq_index_0, int seq_index_1) | ~~~~^~~~~~ make_ng86.c: In function ‘readcodon’: make_ng86.c:158:16: warning: variable ‘cvalue’ set but not used [-Wunused-but-set-variable] 158 | int k, cvalue; | ^~~~~~ gcc -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 make_ng86.o -o make_ng86 ./make_ng86 ng86_ds.h gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. ng86_ds.c -o ng86_ds.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. lost.c -o lost.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. tree_plot.c -o tree_plot.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. cpp_utils.cc -o cpp_utils.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. read_aln.cc -o read_aln.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. pre_cons.c -o pre_cons.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. simulate.c -o simulate.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. compare.cc -o compare.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. order.c -o order.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. nhx_output.cc -o nhx_output.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. nj2.c -o nj2.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. backtrans.cc -o backtrans.o backtrans.cc: In function ‘MultiAlign* ma_back_trans_core(MultiAlign*, hash_map_char*, double)’: backtrans.cc:56:74: warning: array subscript has type ‘char’ [-Wchar-subscripts] 56 | aln_aa[j] = aln_aa_rev_table[aa->seq[i][j]]; | ~~~~~~~~~~~~^ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. phyml.c -o phyml.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. mmerge.cc -o mmerge.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. est_len.c -o est_len.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. best.c -o best.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. trimpoor.cc -o trimpoor.o ar -cru libphylotree.a lex.yy.o y.tab.o read.o nj.o utils1.o subtree.o sdi.o bs_nj.o reroot.o task.o output.o ortho.o cut_tree.o spec.o utils2.o align.o filter.o aln_mask.o prob_dist.o brent.o ng86_ds.o lost.o tree_plot.o cpp_utils.o read_aln.o pre_cons.o simulate.o compare.o order.o nhx_output.o nj2.o backtrans.o phyml.o mmerge.o est_len.o best.o trimpoor.o make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290' make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/align_lib' gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 aa2nt.c -o aa2nt.o -I. -I.. aa2nt.c: In function ‘aln_aa2nt_global_core’: aa2nt.c:216:49: warning: variable ‘band_width’ set but not used [-Wunused-but-set-variable] 216 | int gap_open, gap_ext, gap_end, gap_oe, band_width; | ^~~~~~~~~~ aa2nt.c:216:32: warning: variable ‘gap_end’ set but not used [-Wunused-but-set-variable] 216 | int gap_open, gap_ext, gap_end, gap_oe, band_width; | ^~~~~~~ aa2nt.c:210:20: warning: variable ‘mi’ set but not used [-Wunused-but-set-variable] 210 | int max_M, mi, mj; | ^~ gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 aa2nt_local.c -o aa2nt_local.o -I. -I.. aa2nt_local.c: In function ‘aln_aa2nt_local_core’: aa2nt_local.c:146:32: warning: variable ‘gap_end’ set but not used [-Wunused-but-set-variable] 146 | int gap_open, gap_ext, gap_end, gap_oe; | ^~~~~~~ aa2nt_local.c: In function ‘aln_nt2aa’: aa2nt_local.c:207:13: warning: variable ‘score’ set but not used [-Wunused-but-set-variable] 207 | int score; | ^~~~~ aa2nt_local.c:233:19: warning: ‘*nt’ may be used uninitialized [-Wmaybe-uninitialized] 233 | utmp = (nt[0]<<2)|nt[1]; | ~~^~~ aa2nt_local.c:233:29: warning: ‘nt[1]’ may be used uninitialized [-Wmaybe-uninitialized] 233 | utmp = (nt[0]<<2)|nt[1]; | ~~^~~ gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 transaln.c -o transaln.o -I. -I.. gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 splice.c -o splice.o -I. -I.. splice.c: In function ‘aln_splice_global_core’: splice.c:162:40: warning: variable ‘good_splice’ set but not used [-Wunused-but-set-variable] 162 | int gap_open, gap_ext, gap_oe, good_splice, bad_splice, *sc_matrix; | ^~~~~~~~~~~ gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 splice_local.c -o splice_local.o -I. -I.. splice_local.c: In function ‘aln_splice_local_core’: splice_local.c:128:40: warning: variable ‘good_splice’ set but not used [-Wunused-but-set-variable] 128 | int gap_open, gap_ext, gap_oe, good_splice, bad_splice, *sc_matrix; | ^~~~~~~~~~~ In file included from seq.h:27, from splice_local.c:26: ../common/common.h:27:19: warning: ‘free’ called on pointer ‘*(int **)((char *)s_array+ ivtmp*8)’ with nonzero offset 4 [-Wfree-nonheap-object] 27 | #define MYFREE free splice_local.c:249:17: note: in expansion of macro ‘MYFREE’ 249 | MYFREE(s_array[i] + 1); | ^~~~~~ gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 splice_bound.c -o splice_bound.o -I. -I.. splice_bound.c: In function ‘aln_splice_bound_core’: splice_bound.c:89:40: warning: variable ‘good_splice’ set but not used [-Wunused-but-set-variable] 89 | int gap_open, gap_ext, gap_oe, good_splice, bad_splice, *sc_matrix; | ^~~~~~~~~~~ In file included from seq.h:27, from splice_bound.c:26: ../common/common.h:27:19: warning: ‘free’ called on pointer ‘*(int **)((char *)s_array+ ivtmp*8)’ with nonzero offset 4 [-Wfree-nonheap-object] 27 | #define MYFREE free splice_bound.c:195:17: note: in expansion of macro ‘MYFREE’ 195 | MYFREE(s_array[i] + 1); | ^~~~~~ gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 common_align.c -o common_align.o -I. -I.. common_align.c: In function ‘aln_local_core’: common_align.c:316:41: warning: variable ‘b’ set but not used [-Wunused-but-set-variable] 316 | int gap_open, gap_ext, gap_end, b; | ^ In file included from seq.h:27, from common_align.c:24: ../common/common.h:27:19: warning: ‘free’ called on pointer ‘*(int **)((char *)(void *) ivtmp.270_544)’ with nonzero offset 4 [-Wfree-nonheap-object] 27 | #define MYFREE free common_align.c:503:17: note: in expansion of macro ‘MYFREE’ 503 | MYFREE(s_array[i]); | ^~~~~~ gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 seq.c -o seq.o -I. -I.. gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 table.c -o table.o -I. -I.. gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 align.c -o align.o -I. -I.. gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 pwalign.c -o pwalign.o -I. -I.. ar -cru libalign.a aa2nt.o aa2nt_local.o transaln.o splice.o splice_local.o splice_bound.o common_align.o seq.o table.o align.o pwalign.o make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/align_lib' make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/phyml' gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. bionj.c -o bionj.o gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. eigen.c -o eigen.o eigen.c: In function ‘cmatinv’: eigen.c:182:12: warning: variable ‘xmax’ set but not used [-Wunused-but-set-variable] 182 | complex xmax, t,t1; | ^~~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. free.c -o free.o free.c: In function ‘Free_SubTree’: free.c:185:25: warning: unused parameter ‘b_fcus’ [-Wunused-parameter] 185 | void Free_SubTree(edge *b_fcus, node *a, node *d, arbre *tree) | ~~~~~~^~~~~~ free.c: In function ‘Free_Tree_Ins_Tar’: free.c:205:31: warning: unused parameter ‘tree’ [-Wunused-parameter] 205 | void Free_Tree_Ins_Tar(arbre *tree) | ~~~~~~~^~~~ free.c: In function ‘Free_Tree_Lk’: free.c:216:9: warning: variable ‘n’ set but not used [-Wunused-but-set-variable] 216 | node *n; | ^ free.c: In function ‘Free_Node_Lk’: free.c:294:25: warning: unused parameter ‘n’ [-Wunused-parameter] 294 | void Free_Node_Lk(node *n) | ~~~~~~^ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. ml.c -o ml.o ml.c: In function ‘Make_Tree_4_Lk’: ml.c:1425:55: warning: unused parameter ‘n_site’ [-Wunused-parameter] 1425 | void Make_Tree_4_Lk(arbre *tree, allseq *alldata, int n_site) | ~~~~^~~~~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. models.c -o models.o models.c: In function ‘dPMat_K80’: models.c:67:15: warning: variable ‘dTvk’ set but not used [-Wunused-but-set-variable] 67 | double dTvl,dTvk; | ^~~~ models.c:66:15: warning: variable ‘dTsk’ set but not used [-Wunused-but-set-variable] 66 | double dTsl,dTsk; | ^~~~ models.c: In function ‘d2PMat_K80’: models.c:109:16: warning: variable ‘d2Tsk’ set but not used [-Wunused-but-set-variable] 109 | double d2Tsl,d2Tsk; | ^~~~~ models.c: In function ‘Matinv’: models.c:339:46: warning: unused parameter ‘space’ [-Wunused-parameter] 339 | int Matinv (double *x, int n, int m, double *space) | ~~~~~~~~^~~~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. optimiz.c -o optimiz.o optimiz.c: In function ‘Round_Optimize’: optimiz.c:788:26: warning: variable ‘tol’ set but not used [-Wunused-but-set-variable] 788 | double lk_old, lk_new, tol; | ^~~ optimiz.c: In function ‘Br_Len_NR’: optimiz.c:915:10: warning: variable ‘mult’ set but not used [-Wunused-but-set-variable] 915 | double mult; | ^~~~ optimiz.c:914:11: warning: variable ‘r_l’ set but not used [-Wunused-but-set-variable] 914 | int l_r,r_l; | ^~~ optimiz.c:914:7: warning: variable ‘l_r’ set but not used [-Wunused-but-set-variable] 914 | int l_r,r_l; | ^~~ optimiz.c:909:38: warning: unused parameter ‘alldata’ [-Wunused-parameter] 909 | double Br_Len_NR(arbre *tree,allseq *alldata, edge *b_fcus, int n_passes) | ~~~~~~~~^~~~~~~ optimiz.c: In function ‘Print_Lk_Progress’: optimiz.c:1113:31: warning: unused parameter ‘tree’ [-Wunused-parameter] 1113 | void Print_Lk_Progress(arbre *tree, double lk_new, double lk_old, int n_iter) | ~~~~~~~^~~~ optimiz.c: In function ‘Optimiz_Ext_Br’: optimiz.c:1150:10: warning: variable ‘lk’ set but not used [-Wunused-but-set-variable] 1150 | double lk, lk_init; | ^~ optimiz.c: In function ‘Optimiz_All_Free_Param’: optimiz.c:1230:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1230 | if(verbose) printf("\n. Optimisation of the ts/tv ratio...\n");fflush(stdout); | ^~ optimiz.c:1230:70: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1230 | if(verbose) printf("\n. Optimisation of the ts/tv ratio...\n");fflush(stdout); | ^~~~~~ optimiz.c:1244:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1244 | if(verbose) printf("\n. Optimisation of the proportion of invariable sites...\n");fflush(stdout); | ^~ optimiz.c:1244:89: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1244 | if(verbose) printf("\n. Optimisation of the proportion of invariable sites...\n");fflush(stdout); | ^~~~~~ optimiz.c:1252:7: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1252 | if(verbose) printf("\n. Optimisation of the gamma shape parameter...\n");fflush(stdout); | ^~ optimiz.c:1252:80: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1252 | if(verbose) printf("\n. Optimisation of the gamma shape parameter...\n");fflush(stdout); | ^~~~~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. options.c -o options.o options.c: In function ‘Get_Input_CommandLine_Common’: options.c:230:54: warning: unused parameter ‘argc’ [-Wunused-parameter] 230 | void Get_Input_CommandLine_Common(option *input, int argc, char **argv) | ~~~~^~~~ options.c: In function ‘Get_Input_Interactive’: options.c:751:59: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 751 | (input->mod->s_opt->opt_kappa)?(strcat(s, "")):((char *)sprintf(s+(int)strlen(s),"%3.2f)",input->mod->kappa)); | ^ options.c:761:55: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 761 | (input->mod->s_opt->opt_pinvar)?(strcat(s,"")):((char *)sprintf(s+strlen(s),"%3.2f)",input->mod->pinvar)); | ^ options.c:785:59: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 785 | (input->mod->s_opt->opt_alpha)?(strcat(s, "")):((char *)sprintf(s+strlen(s),"%3.2f)",input->mod->alpha)); | ^ options.c:915:41: warning: this statement may fall through [-Wimplicit-fallthrough=] 915 | input->mod->s_opt->opt_topo = | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 916 | (input->mod->s_opt->opt_topo)?(0):(1); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ options.c:918:9: note: here 918 | case 'W' : | ^~~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. simu.c -o simu.o simu.c: In function ‘Simu’: simu.c:177:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 177 | if(tree->mod->s_opt->print) | ^~ simu.c:178:62: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 178 | printf("\n\n. Last optimization step...\n"); fflush(NULL); | ^~~~~~ simu.c:54:36: warning: variable ‘diff_lk’ set but not used [-Wunused-but-set-variable] 54 | double old_loglk,n_iter,lambda,diff_lk; | ^~~~~~~ simu.c: In function ‘Select_Edges_To_Swap’: simu.c:189:7: warning: variable ‘min’ set but not used [-Wunused-but-set-variable] 189 | int min; | ^~~ gcc -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. utilities.c -o utilities.o utilities.c: In function ‘Make_Edge_Lk’: utilities.c:824:7: warning: variable ‘len’ set but not used [-Wunused-but-set-variable] 824 | int len; | ^~~ utilities.c: In function ‘Make_Node_Lk’: utilities.c:922:25: warning: unused parameter ‘n’ [-Wunused-parameter] 922 | void Make_Node_Lk(node *n) | ~~~~~~^ utilities.c: In function ‘Get_Seq’: utilities.c:930:35: warning: unused parameter ‘rw’ [-Wunused-parameter] 930 | seq **Get_Seq(option *input, int rw) | ~~~~^~ utilities.c: In function ‘Sort_Edges_Diff_Lk’: utilities.c:2203:31: warning: unused parameter ‘tree’ [-Wunused-parameter] 2203 | int Sort_Edges_Diff_Lk(arbre *tree, edge **sorted_edges, int n_elem) | ~~~~~~~^~~~ utilities.c: In function ‘NNI’: utilities.c:2227:9: warning: variable ‘v1’ set but not used [-Wunused-but-set-variable] 2227 | node *v1,*v2,*v3,*v4; | ^~ utilities.c:2226:7: warning: variable ‘l_r’ set but not used [-Wunused-but-set-variable] 2226 | int l_r, r_l, l_v1, l_v2, r_v3, r_v4; | ^~~ utilities.c: In function ‘Swap’: utilities.c:2410:54: warning: unused parameter ‘tree’ [-Wunused-parameter] 2410 | void Swap(node *a, node *b, node *c, node *d, arbre *tree) | ~~~~~~~^~~~ utilities.c: In function ‘Print_Fp_Out’: utilities.c:2737:93: warning: unused parameter ‘n_data_set’ [-Wunused-parameter] 2737 | void Print_Fp_Out(FILE *fp_out, time_t t_beg, time_t t_end, arbre *tree, option *input, int n_data_set) | ~~~~^~~~~~~~~~ utilities.c: In function ‘Print_Fp_Out_Lines’: utilities.c:2848:46: warning: unused parameter ‘t_beg’ [-Wunused-parameter] 2848 | void Print_Fp_Out_Lines(FILE *fp_out, time_t t_beg, time_t t_end, arbre *tree, option *input, int n_data_set) | ~~~~~~~^~~~~ utilities.c:2848:60: warning: unused parameter ‘t_end’ [-Wunused-parameter] 2848 | void Print_Fp_Out_Lines(FILE *fp_out, time_t t_beg, time_t t_end, arbre *tree, option *input, int n_data_set) | ~~~~~~~^~~~~ utilities.c: In function ‘K2P_dist’: utilities.c:3065:10: warning: variable ‘unc_len’ set but not used [-Wunused-but-set-variable] 3065 | double unc_len; | ^~~~~~~ utilities.c: In function ‘JC69_Dist’: utilities.c:3172:10: warning: variable ‘unc_len’ set but not used [-Wunused-but-set-variable] 3172 | double unc_len; | ^~~~~~~ utilities.c: In function ‘Hamming_Dist’: utilities.c:3247:10: warning: variable ‘unc_len’ set but not used [-Wunused-but-set-variable] 3247 | double unc_len; | ^~~~~~~ g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. lh3_addon.cc -o lh3_addon.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DUNIX -DLH3_REVISION -DLH3_ADDON -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. lh3_spec.cc -o lh3_spec.o lh3_spec.cc: In function ‘double lh3_spec_update_one_ratio(arbre*, edge*)’: lh3_spec.cc:214:53: warning: unused parameter ‘b_fcus’ [-Wunused-parameter] 214 | double lh3_spec_update_one_ratio(arbre *tree, edge *b_fcus) | ~~~~~~^~~~~~ ar -cru libphyml.a bionj.o eigen.o free.o ml.o models.o optimiz.o options.o simu.o utilities.o lh3_addon.o lh3_spec.o make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/phyml' gcc -c -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -DTR_VERSION="\"1.9.2\"" -DTR_BUILD=\"`date +%d%b%Y`\" main.c -o main.o g++ -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 main.o -o treebest -L. -lphylotree -Lalign_lib -lalign -lm -Lphyml -lphyml make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290' make[1]: Nothing to be done for 'lib'. make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290' make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/align_lib' make[1]: Nothing to be done for 'lib'. make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/align_lib' make[1]: Entering directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/phyml' make[1]: Nothing to be done for 'lib'. make[1]: Leaving directory '/usr/src/slapt-src/academic/treebest-ensembl/treebest-347fa82a0ce1c169849053fdc9ff7d19d221f290/phyml' fluid -c flnjtree_ui.fl g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. flnjtree.cc -o flnjtree.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. flnjtree_ui.cc -o flnjtree_ui.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. flglobal.cc -o flglobal.o flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 6 | Fl_Menu_Item menu_format[] = { {"auto"}, {"fasta"}, {"aln"}, {0} }; | ^ flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:6:66: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 7 | Fl_Menu_Item menu_type[] = { {"amino acid"}, {"codon"}, {0} }; | ^ flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:7:61: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 8 | Fl_Menu_Item menu_nt_type[] = { {"merge"}, {"synonymous"}, {"nonsynonymous"}, {0} }; | ^ flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:8:83: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 9 | Fl_Menu_Item menu_aa_type[] = { {"mismatch"}, {"Kimura"}, {"JTT"}, {0} }; | ^ flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:9:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 10 | Fl_Menu_Item menu_workspace[] = { {"Artemis"}, {"Dionysus"}, {"Selena"}, {0} }; | ^ flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:10:78: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 11 | Fl_Menu_Item menu_phyml_type[] = { {"nucleotide"}, {"amino acid"}, {0} }; | ^ flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:11:72: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 12 | Fl_Menu_Item menu_phyml_nt_model[] = { {"HKY"}, {"JC69"}, {"K2P"}, {"F81"}, {"F84"}, {"TN93"}, {"GTR"}, {0} }; | ^ flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:12:109: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] 13 | Fl_Menu_Item menu_phyml_aa_model[] = { {"WAG"}, {"JTT"}, {"MtREV"}, {"Dayhoff"}, {0} }; | ^ flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::shortcut_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::callback_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::user_data_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::flags’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labeltype_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelfont_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelsize_’ [-Wmissing-field-initializers] flglobal.cc:13:86: warning: missing initializer for member ‘Fl_Menu_Item::labelcolor_’ [-Wmissing-field-initializers] flglobal.cc:15:24: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 15 | char *g_workspace[] = {"Artemis", "Dionysis", "Selena"}; | ^~~~~~~~~ flglobal.cc:15:35: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 15 | char *g_workspace[] = {"Artemis", "Dionysis", "Selena"}; | ^~~~~~~~~~ flglobal.cc:15:47: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 15 | char *g_workspace[] = {"Artemis", "Dionysis", "Selena"}; | ^~~~~~~~ g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. flworkspace.cc -o flworkspace.o g++ -c -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -I. flcallback.cc -o flcallback.o flcallback.cc: In function ‘void cb_phyml(Fl_Widget*, void*)’: flcallback.cc:5:26: warning: unused parameter ‘w’ [-Wunused-parameter] 5 | void cb_phyml(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_inv(Fl_Widget*, void*)’: flcallback.cc:16:30: warning: unused parameter ‘w’ [-Wunused-parameter] 16 | void cb_phyml_inv(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_alpha(Fl_Widget*, void*)’: flcallback.cc:22:32: warning: unused parameter ‘w’ [-Wunused-parameter] 22 | void cb_phyml_alpha(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_has_tree(Fl_Widget*, void*)’: flcallback.cc:28:35: warning: unused parameter ‘w’ [-Wunused-parameter] 28 | void cb_phyml_has_tree(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_tstv(Fl_Widget*, void*)’: flcallback.cc:34:31: warning: unused parameter ‘w’ [-Wunused-parameter] 34 | void cb_phyml_tstv(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_n_cat(Fl_Widget*, void*)’: flcallback.cc:41:32: warning: unused parameter ‘w’ [-Wunused-parameter] 41 | void cb_phyml_n_cat(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_browse(Fl_Widget*, void*)’: flcallback.cc:73:33: warning: unused parameter ‘w’ [-Wunused-parameter] 73 | void cb_phyml_browse(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_phyml_tree(Fl_Widget*, void*)’: flcallback.cc:84:20: warning: ‘int fl_ask(const char*, ...)’ is deprecated [-Wdeprecated-declarations] 84 | if (!fl_ask("Building ML tree is usually very slow.\nFLtreeBeST might not respond for a long time.\nBe patient, or explicitly kill the program.")) { | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/FL/Fl_File_Chooser.H:46, from flglobal.h:10, from flcallback.cc:2: /usr/include/FL/fl_ask.H:55:15: note: declared here 55 | FL_EXPORT int fl_ask(const char *,...) __fl_attr((__format__ (__printf__, 1, 2), __deprecated__)); | ^~~~~~ flcallback.cc:89:58: warning: format ‘%s’ expects argument of type ‘char*’, but argument 2 has type ‘Workspace*’ [-Wformat=] 89 | fl_alert("No tree is found in workspace %s.", g->workspace[g->phyml->i_tree->value()]); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | char* Workspace* flcallback.cc:82:31: warning: unused parameter ‘w’ [-Wunused-parameter] 82 | void cb_phyml_tree(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_build(Fl_Widget*, void*)’: flcallback.cc:98:26: warning: unused parameter ‘w’ [-Wunused-parameter] 98 | void cb_build(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_merge(Fl_Widget*, void*)’: flcallback.cc:108:26: warning: unused parameter ‘w’ [-Wunused-parameter] 108 | void cb_merge(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_compare(Fl_Widget*, void*)’: flcallback.cc:113:28: warning: unused parameter ‘w’ [-Wunused-parameter] 113 | void cb_compare(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_backtrans(Fl_Widget*, void*)’: flcallback.cc:118:30: warning: unused parameter ‘w’ [-Wunused-parameter] 118 | void cb_backtrans(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_close_build(Fl_Widget*, void*)’: flcallback.cc:123:32: warning: unused parameter ‘w’ [-Wunused-parameter] 123 | void cb_close_build(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_close_phyml(Fl_Widget*, void*)’: flcallback.cc:128:32: warning: unused parameter ‘w’ [-Wunused-parameter] 128 | void cb_close_phyml(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_close_merge(Fl_Widget*, void*)’: flcallback.cc:133:32: warning: unused parameter ‘w’ [-Wunused-parameter] 133 | void cb_close_merge(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_close_backtrans(Fl_Widget*, void*)’: flcallback.cc:138:36: warning: unused parameter ‘w’ [-Wunused-parameter] 138 | void cb_close_backtrans(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_close_compare(Fl_Widget*, void*)’: flcallback.cc:143:34: warning: unused parameter ‘w’ [-Wunused-parameter] 143 | void cb_close_compare(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_build_tree(Fl_Widget*, void*)’: flcallback.cc:152:58: warning: format ‘%s’ expects argument of type ‘char*’, but argument 2 has type ‘Workspace*’ [-Wformat=] 152 | fl_alert("No tree is found in workspace %s.", g->workspace[g->build->i_cons_tree->value()]); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | char* Workspace* flcallback.cc:148:31: warning: unused parameter ‘w’ [-Wunused-parameter] 148 | void cb_build_tree(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_toggle_cons(Fl_Widget*, void*)’: flcallback.cc:159:32: warning: unused parameter ‘w’ [-Wunused-parameter] 159 | void cb_toggle_cons(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_do_backtrans(Fl_Widget*, void*)’: flcallback.cc:166:33: warning: unused parameter ‘w’ [-Wunused-parameter] 166 | void cb_do_backtrans(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_merge_tree(Fl_Widget*, void*)’: flcallback.cc:172:31: warning: unused parameter ‘w’ [-Wunused-parameter] 172 | void cb_merge_tree(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_compare_tree(Fl_Widget*, void*)’: flcallback.cc:179:33: warning: unused parameter ‘w’ [-Wunused-parameter] 179 | void cb_compare_tree(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_prev(Fl_Widget*, void*)’: flcallback.cc:186:25: warning: unused parameter ‘w’ [-Wunused-parameter] 186 | void cb_prev(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_next(Fl_Widget*, void*)’: flcallback.cc:192:25: warning: unused parameter ‘w’ [-Wunused-parameter] 192 | void cb_next(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_update_buttons(Fl_Widget*, void*)’: flcallback.cc:198:35: warning: unused parameter ‘w’ [-Wunused-parameter] 198 | void cb_update_buttons(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_open(Fl_Widget*, void*)’: flcallback.cc:227:25: warning: unused parameter ‘w’ [-Wunused-parameter] 227 | void cb_open(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_save(Fl_Widget*, void*)’: flcallback.cc:241:25: warning: unused parameter ‘w’ [-Wunused-parameter] 241 | void cb_save(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_expt(Fl_Widget*, void*)’: flcallback.cc:249:25: warning: unused parameter ‘w’ [-Wunused-parameter] 249 | void cb_expt(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_root(Fl_Widget*, void*)’: flcallback.cc:257:25: warning: unused parameter ‘w’ [-Wunused-parameter] 257 | void cb_root(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_browse(Fl_Widget*, void*)’: flcallback.cc:263:27: warning: unused parameter ‘w’ [-Wunused-parameter] 263 | void cb_browse(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_browse_aa_aln(Fl_Widget*, void*)’: flcallback.cc:272:34: warning: unused parameter ‘w’ [-Wunused-parameter] 272 | void cb_browse_aa_aln(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_browse_nt_seq(Fl_Widget*, void*)’: flcallback.cc:281:34: warning: unused parameter ‘w’ [-Wunused-parameter] 281 | void cb_browse_nt_seq(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_browse_nt_aln(Fl_Widget*, void*)’: flcallback.cc:290:34: warning: unused parameter ‘w’ [-Wunused-parameter] 290 | void cb_browse_nt_aln(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_zoom_in_x(Fl_Widget*, void*)’: flcallback.cc:313:30: warning: unused parameter ‘w’ [-Wunused-parameter] 313 | void cb_zoom_in_x(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_zoom_out_x(Fl_Widget*, void*)’: flcallback.cc:320:31: warning: unused parameter ‘w’ [-Wunused-parameter] 320 | void cb_zoom_out_x(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_zoom_in_y(Fl_Widget*, void*)’: flcallback.cc:327:30: warning: unused parameter ‘w’ [-Wunused-parameter] 327 | void cb_zoom_in_y(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_zoom_out_y(Fl_Widget*, void*)’: flcallback.cc:334:31: warning: unused parameter ‘w’ [-Wunused-parameter] 334 | void cb_zoom_out_y(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_small_font(Fl_Widget*, void*)’: flcallback.cc:341:31: warning: unused parameter ‘w’ [-Wunused-parameter] 341 | void cb_small_font(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_large_font(Fl_Widget*, void*)’: flcallback.cc:347:31: warning: unused parameter ‘w’ [-Wunused-parameter] 347 | void cb_large_font(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_spec(Fl_Widget*, void*)’: flcallback.cc:353:25: warning: unused parameter ‘w’ [-Wunused-parameter] 353 | void cb_spec(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_real(Fl_Widget*, void*)’: flcallback.cc:359:25: warning: unused parameter ‘w’ [-Wunused-parameter] 359 | void cb_real(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ flcallback.cc: In function ‘void cb_order(Fl_Widget*, void*)’: flcallback.cc:365:26: warning: unused parameter ‘w’ [-Wunused-parameter] 365 | void cb_order(Fl_Widget *w, void *global) | ~~~~~~~~~~~^ g++ -O2 -fPIC -fcommon -W -Wall -O2 -fomit-frame-pointer -DUSE_GCC -DHAVE_PHYML -DLH3_ADDON -DYYMAXDEPTH=90000 -DYYINITDEPTH=60000 -o fltreebest flnjtree.o flnjtree_ui.o flglobal.o flworkspace.o flcallback.o `fltk-config --cxxflags` `fltk-config --ldstaticflags` -L. -lphylotree -Lalign_lib -lalign -lm -Lphyml -lphyml; \ fltk-config --post fltreebest /usr/bin/ld: flnjtree.o: in function `main': flnjtree.cc:(.text.startup+0x5): undefined reference to `FL_NORMAL_SIZE' /usr/bin/ld: flnjtree.cc:(.text.startup+0xd4): undefined reference to `Fl::run()' /usr/bin/ld: flnjtree_ui.o: in function `make_build_window(void*)': flnjtree_ui.cc:(.text+0x5a): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x5f): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x9c): undefined reference to `Fl_Return_Button::Fl_Return_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xa1): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe4): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe9): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x12c): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x131): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x174): undefined reference to `Fl_Input::Fl_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1a9): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ae): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1cb): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x207): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x20c): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x229): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x25a): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x25f): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x27c): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2ad): undefined reference to `Fl_Int_Input::Fl_Int_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2f7): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x328): undefined reference to `Fl_Int_Input::Fl_Int_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x35e): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x38f): undefined reference to `Fl_Progress::Fl_Progress(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x3b0): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x3c2): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x3d1): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x402): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x411): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x459): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x45e): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x470): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x47f): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x4b4): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x4c3): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x4d4): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x4dc): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `make_merge_window(void*)': flnjtree_ui.cc:(.text+0x5a4): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x5a9): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x5e2): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x5e7): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x607): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x638): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x63d): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x656): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x687): undefined reference to `Fl_Return_Button::Fl_Return_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x68c): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x6cf): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x6d4): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x6ee): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `make_comp_window(void*)': flnjtree_ui.cc:(.text+0x766): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x76b): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x7a4): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x7a9): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x7c2): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x7f7): undefined reference to `Fl_Return_Button::Fl_Return_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x7fc): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x83f): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x844): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x85e): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `make_trans_window(void*)': flnjtree_ui.cc:(.text+0x8c6): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x8cb): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x901): undefined reference to `Fl_Input::Fl_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x936): undefined reference to `Fl_Input::Fl_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x96b): undefined reference to `Fl_Input::Fl_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x9a0): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x9a5): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x9e8): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x9ed): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xa30): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xa35): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xa78): undefined reference to `Fl_Return_Button::Fl_Return_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xa7d): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xac0): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xac5): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xadf): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `make_phyml_window(void*)': flnjtree_ui.cc:(.text+0xb7a): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xb7f): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xbb4): undefined reference to `Fl_Input::Fl_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xbe9): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xbee): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xc31): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xc36): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xc53): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xc8f): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xc94): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xcb1): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xce2): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xce7): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xd04): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xd35): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xd44): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xd49): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xd5b): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xd6e): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xd9f): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xdb1): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xdc3): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe03): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe1c): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe53): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe66): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xe97): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xea6): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xebb): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xefb): undefined reference to `Fl_Int_Input::Fl_Int_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xf0a): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xf4c): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xf8c): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xf9b): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0xfd2): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0xfe5): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1016): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1025): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1031): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1042): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1082): undefined reference to `Fl_Progress::Fl_Progress(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1091): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x10a7): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x10d8): undefined reference to `Fl_Return_Button::Fl_Return_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x10dd): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1120): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1125): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1168): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1177): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x117c): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1187): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x11b8): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x11c7): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1209): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x123a): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1249): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x125e): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x129e): undefined reference to `Fl_Int_Input::Fl_Int_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x12b7): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x12ed): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x131e): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x132d): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x133e): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1376): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x13a1): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x13d2): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x13fd): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x142e): undefined reference to `Fl_Float_Input::Fl_Float_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1459): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x148a): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1496): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x14c7): undefined reference to `Fl_Choice::Fl_Choice(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x14cc): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x14de): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x150f): undefined reference to `Fl_Check_Button::Fl_Check_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x151a): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1526): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1557): undefined reference to `Fl_Int_Input::Fl_Int_Input(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x158d): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1595): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `make_main_window(void*)': flnjtree_ui.cc:(.text+0x16c3): undefined reference to `Fl_Double_Window::Fl_Double_Window(int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x16f3): undefined reference to `Fl_Tabs::Fl_Tabs(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x16f8): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x172d): undefined reference to `Fl_Group::Fl_Group(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x175f): undefined reference to `Fl_Scroll::Fl_Scroll(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x17d2): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x17da): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1808): undefined reference to `Fl_Group::Fl_Group(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1818): undefined reference to `Fl_Widget::hide()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1842): undefined reference to `Fl_Scroll::Fl_Scroll(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x18b5): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x18bd): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x18eb): undefined reference to `Fl_Group::Fl_Group(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x18fb): undefined reference to `Fl_Widget::hide()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1925): undefined reference to `Fl_Scroll::Fl_Scroll(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1998): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x19a0): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x19c3): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x19f4): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1a03): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1a08): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1a59): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1a68): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1a6d): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1a86): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1acd): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1adc): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ae1): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1afa): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1b41): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1b50): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1b55): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ba6): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1bb5): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1bba): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1bd3): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1c1a): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1c29): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1c2e): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1c7b): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1c8a): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1c8f): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1cdc): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ceb): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1cf0): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1d41): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1d50): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1d55): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1da6): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1db5): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1dba): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1e0b): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1e1a): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1e1f): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1e70): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1e7f): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1e84): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ed5): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ee4): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1ee9): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1f3a): undefined reference to `Fl_Light_Button::Fl_Light_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1f49): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1f4e): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1fa7): undefined reference to `Fl_Light_Button::Fl_Light_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1fb6): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1fbb): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x1fe8): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2021): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2030): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2035): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x204e): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2095): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x20a4): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x20a9): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x20c2): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2109): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2118): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x211d): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2136): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x217d): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x218c): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2191): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x21db): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x21ea): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x21ef): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2239): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x2248): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x224d): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x229e): undefined reference to `Fl_Button::Fl_Button(int, int, int, int, char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x22ad): undefined reference to `Fl_Widget::tooltip(char const*)' /usr/bin/ld: flnjtree_ui.cc:(.text+0x22b2): undefined reference to `fl_define_FL_PLASTIC_UP_BOX()' /usr/bin/ld: flnjtree_ui.cc:(.text+0x22da): undefined reference to `Fl_Group::end()' /usr/bin/ld: flnjtree_ui.o: in function `cb_Help(Fl_Button*, void*)': flnjtree_ui.cc:(.text+0xa): undefined reference to `fl_message(char const*, ...)' /usr/bin/ld: flglobal.o: in function `progress_func(double)': flglobal.cc:(.text+0x50): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flglobal.cc:(.text+0x5f): undefined reference to `Fl_Widget::label(char const*)' /usr/bin/ld: flglobal.cc:(.text+0x64): undefined reference to `Fl::flush()' /usr/bin/ld: flglobal.o: in function `FNglobal::active_ws()': flglobal.cc:(.text+0x85): undefined reference to `Fl_Widget::visible_r() const' /usr/bin/ld: flglobal.o: in function `FNglobal::change_ws(int)': flglobal.cc:(.text+0xcd): undefined reference to `Fl_Widget::visible_r() const' /usr/bin/ld: flglobal.o: in function `FNphyml::do_phyml()': flglobal.cc:(.text+0x582): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.o: in function `FNglobal::FNglobal()': flglobal.cc:(.text+0x668): undefined reference to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' /usr/bin/ld: flglobal.cc:(.text+0x697): undefined reference to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' /usr/bin/ld: flglobal.cc:(.text+0x6c6): undefined reference to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' /usr/bin/ld: flglobal.cc:(.text+0x6f5): undefined reference to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' /usr/bin/ld: flglobal.cc:(.text+0x71d): undefined reference to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' /usr/bin/ld: flglobal.o:flglobal.cc:(.text+0x748): more undefined references to `Fl_File_Chooser::Fl_File_Chooser(char const*, char const*, int, char const*)' follow /usr/bin/ld: flglobal.o: in function `FNglobal::FNglobal()': flglobal.cc:(.text+0x7b9): undefined reference to `Fl_File_Chooser::textsize(int)' /usr/bin/ld: flglobal.cc:(.text+0x7c7): undefined reference to `Fl_File_Chooser::textsize(int)' /usr/bin/ld: flglobal.cc:(.text+0x7d5): undefined reference to `Fl_File_Chooser::textsize(int)' /usr/bin/ld: flglobal.cc:(.text+0x7e3): undefined reference to `Fl_File_Chooser::textsize(int)' /usr/bin/ld: flglobal.o: in function `FNglobal::~FNglobal()': flglobal.cc:(.text+0xab1): undefined reference to `Fl_File_Chooser::~Fl_File_Chooser()' /usr/bin/ld: flglobal.cc:(.text+0xacf): undefined reference to `Fl_File_Chooser::~Fl_File_Chooser()' /usr/bin/ld: flglobal.cc:(.text+0xaed): undefined reference to `Fl_File_Chooser::~Fl_File_Chooser()' /usr/bin/ld: flglobal.cc:(.text+0xb0b): undefined reference to `Fl_File_Chooser::~Fl_File_Chooser()' /usr/bin/ld: flglobal.cc:(.text+0xb29): undefined reference to `Fl_File_Chooser::~Fl_File_Chooser()' /usr/bin/ld: flglobal.o:flglobal.cc:(.text+0xb47): more undefined references to `Fl_File_Chooser::~Fl_File_Chooser()' follow /usr/bin/ld: flglobal.o: in function `FNglobal::~FNglobal()': flglobal.cc:(.text+0xbd7): undefined reference to `Fl_Widget::~Fl_Widget()' /usr/bin/ld: flglobal.o: in function `FNmerge::merge()': flglobal.cc:(.text+0xf65): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.cc:(.text+0xf7d): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.cc:(.text+0xfa0): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.o: in function `FNcompare::compare()': flglobal.cc:(.text+0x10cb): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.o: in function `FNbacktrans::backtrans()': flglobal.cc:(.text+0x11f2): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flglobal.o: in function `Workspace::~Workspace()': flglobal.cc:(.text._ZN9WorkspaceD0Ev[_ZN9WorkspaceD5Ev]+0x1b): undefined reference to `Fl_Widget::~Fl_Widget()' /usr/bin/ld: flglobal.o: in function `Workspace::~Workspace()': flglobal.cc:(.text._ZN9WorkspaceD2Ev[_ZN9WorkspaceD5Ev]+0x1c): undefined reference to `Fl_Widget::~Fl_Widget()' /usr/bin/ld: flworkspace.o: in function `Workspace::Workspace(int, int, int, int)': flworkspace.cc:(.text+0x11): undefined reference to `Fl_Widget::Fl_Widget(int, int, int, int, char const*)' /usr/bin/ld: flworkspace.o: in function `Workspace::redraw()': flworkspace.cc:(.text+0x125): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flworkspace.o: in function `Workspace::draw_tree()': flworkspace.cc:(.text+0x164): undefined reference to `fl_graphics_driver' /usr/bin/ld: flworkspace.cc:(.text+0x220): undefined reference to `fl_width(char const*)' /usr/bin/ld: flworkspace.cc:(.text+0x44d): undefined reference to `fl_draw(char const*, int, int)' /usr/bin/ld: flworkspace.cc:(.text+0x4f9): undefined reference to `fl_width(char const*)' /usr/bin/ld: flworkspace.cc:(.text+0x51a): undefined reference to `fl_draw(char const*, int, int)' /usr/bin/ld: flworkspace.cc:(.text+0x66c): undefined reference to `fl_width(char const*)' /usr/bin/ld: flworkspace.cc:(.text+0x68c): undefined reference to `fl_draw(char const*, int, int)' /usr/bin/ld: flworkspace.o: in function `Workspace::draw()': flworkspace.cc:(.text+0xd05): undefined reference to `Fl_Widget::draw_box() const' /usr/bin/ld: flworkspace.o: in function `Workspace::redraw()': flworkspace.cc:(.text+0x12f): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flworkspace.o: in function `Workspace::Workspace(int, int, int, int) [clone .cold]': flworkspace.cc:(.text.unlikely+0x4): undefined reference to `Fl_Widget::~Fl_Widget()' /usr/bin/ld: flworkspace.o:(.data.rel.ro._ZTI9Workspace[_ZTI9Workspace]+0x10): undefined reference to `typeinfo for Fl_Widget' /usr/bin/ld: flworkspace.o:(.data.rel.ro._ZTV9Workspace[_ZTV9Workspace]+0x28): undefined reference to `Fl_Widget::handle(int)' /usr/bin/ld: flworkspace.o:(.data.rel.ro._ZTV9Workspace[_ZTV9Workspace]+0x30): undefined reference to `Fl_Widget::resize(int, int, int, int)' /usr/bin/ld: flworkspace.o:(.data.rel.ro._ZTV9Workspace[_ZTV9Workspace]+0x38): undefined reference to `Fl_Widget::show()' /usr/bin/ld: flworkspace.o:(.data.rel.ro._ZTV9Workspace[_ZTV9Workspace]+0x40): undefined reference to `Fl_Widget::hide()' /usr/bin/ld: flcallback.o: in function `cb_phyml(Fl_Widget*, void*)': flcallback.cc:(.text+0xe): undefined reference to `fl_message(char const*, ...)' /usr/bin/ld: flcallback.cc:(.text+0x49): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x61): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_n_cat(Fl_Widget*, void*)': flcallback.cc:(.text+0x173): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x1a1): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_type(Fl_Widget*, void*)': flcallback.cc:(.text+0x204): undefined reference to `Fl_Menu_::clear()' /usr/bin/ld: flcallback.cc:(.text+0x21b): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flcallback.cc:(.text+0x22b): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.cc:(.text+0x23b): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x26c): undefined reference to `Fl_Menu_::clear()' /usr/bin/ld: flcallback.cc:(.text+0x283): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flcallback.cc:(.text+0x293): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.cc:(.text+0x2a3): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_browse(Fl_Widget*, void*)': flcallback.cc:(.text+0x2ce): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0x2d9): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0x2e2): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0x2f4): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x312): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x31d): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flcallback.o: in function `cb_phyml_tree(Fl_Widget*, void*)': flcallback.cc:(.text+0x353): undefined reference to `fl_ask(char const*, ...)' /usr/bin/ld: flcallback.o: in function `cb_build(Fl_Widget*, void*)': flcallback.cc:(.text+0x45b): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x471): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_prev(Fl_Widget*, void*)': flcallback.cc:(.text+0x6d3): undefined reference to `Fl_Tabs::value(Fl_Widget*)' /usr/bin/ld: flcallback.o: in function `cb_next(Fl_Widget*, void*)': flcallback.cc:(.text+0x723): undefined reference to `Fl_Tabs::value(Fl_Widget*)' /usr/bin/ld: flcallback.o: in function `cb_update_buttons(Fl_Widget*, void*)': flcallback.cc:(.text+0x761): undefined reference to `Fl_Tabs::value()' /usr/bin/ld: flcallback.cc:(.text+0x778): undefined reference to `Fl_Tabs::value()' /usr/bin/ld: flcallback.cc:(.text+0x7bb): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x7c7): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x7d3): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x7df): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x7eb): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.o:flcallback.cc:(.text+0x7fc): more undefined references to `Fl_Widget::activate()' follow /usr/bin/ld: flcallback.o: in function `cb_update_buttons(Fl_Widget*, void*)': flcallback.cc:(.text+0x810): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x824): undefined reference to `Fl_Button::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x839): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x845): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x851): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x85d): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x869): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o:flcallback.cc:(.text+0x87a): more undefined references to `Fl_Widget::deactivate()' follow /usr/bin/ld: flcallback.o: in function `cb_open(Fl_Widget*, void*)': flcallback.cc:(.text+0x89f): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0x8a9): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0x8b2): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0x8c4): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x8d7): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.o: in function `cb_save(Fl_Widget*, void*)': flcallback.cc:(.text+0x93e): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0x949): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0x952): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0x964): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0x982): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.o: in function `cb_expt(Fl_Widget*, void*)': flcallback.cc:(.text+0x9be): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0x9c9): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0x9d2): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0x9e4): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xa02): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.o: in function `cb_browse(Fl_Widget*, void*)': flcallback.cc:(.text+0xa6e): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0xa79): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0xa82): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0xa94): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xab2): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xabd): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flcallback.o: in function `cb_browse_aa_aln(Fl_Widget*, void*)': flcallback.cc:(.text+0xaee): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0xaf9): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0xb02): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0xb14): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xb32): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xb3d): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flcallback.o: in function `cb_browse_nt_seq(Fl_Widget*, void*)': flcallback.cc:(.text+0xb6e): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0xb79): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0xb82): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0xb94): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xbb2): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xbbd): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flcallback.o: in function `cb_browse_nt_aln(Fl_Widget*, void*)': flcallback.cc:(.text+0xbee): undefined reference to `Fl_File_Chooser::show()' /usr/bin/ld: flcallback.cc:(.text+0xbf9): undefined reference to `Fl::check()' /usr/bin/ld: flcallback.cc:(.text+0xc02): undefined reference to `Fl_File_Chooser::visible()' /usr/bin/ld: flcallback.cc:(.text+0xc14): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xc32): undefined reference to `Fl_File_Chooser::value(int)' /usr/bin/ld: flcallback.cc:(.text+0xc3d): undefined reference to `Fl_Input_::value(char const*)' /usr/bin/ld: flcallback.o: in function `cb_type(Fl_Widget*, void*)': flcallback.cc:(.text+0xca4): undefined reference to `Fl_Menu_::clear()' /usr/bin/ld: flcallback.cc:(.text+0xcbb): undefined reference to `Fl_Menu_::menu(Fl_Menu_Item const*)' /usr/bin/ld: flcallback.cc:(.text+0xcdc): undefined reference to `Fl_Menu_::clear()' /usr/bin/ld: flcallback.o: in function `cb_phyml_inv(Fl_Widget*, void*)': flcallback.cc:(.text+0x99): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0xa1): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_alpha(Fl_Widget*, void*)': flcallback.cc:(.text+0xc9): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0xd1): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_has_tree(Fl_Widget*, void*)': flcallback.cc:(.text+0xf6): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x101): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_tstv(Fl_Widget*, void*)': flcallback.cc:(.text+0x126): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.cc:(.text+0x131): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_n_cat(Fl_Widget*, void*)': flcallback.cc:(.text+0x196): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x1b2): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_type(Fl_Widget*, void*)': flcallback.cc:(.text+0x256): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x2b4): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_phyml_browse(Fl_Widget*, void*)': flcallback.cc:(.text+0x333): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.o: in function `cb_phyml_tree(Fl_Widget*, void*)': flcallback.cc:(.text+0x3ea): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x410): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flcallback.o: in function `cb_build_tree(Fl_Widget*, void*)': flcallback.cc:(.text+0x5a4): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x5c0): undefined reference to `fl_alert(char const*, ...)' /usr/bin/ld: flcallback.o: in function `cb_toggle_cons(Fl_Widget*, void*)': flcallback.cc:(.text+0x5e6): undefined reference to `Fl_Widget::activate()' /usr/bin/ld: flcallback.cc:(.text+0x5f1): undefined reference to `Fl_Widget::deactivate()' /usr/bin/ld: flcallback.o: in function `cb_prev(Fl_Widget*, void*)': flcallback.cc:(.text+0x6de): undefined reference to `Fl::flush()' /usr/bin/ld: flcallback.o: in function `cb_next(Fl_Widget*, void*)': flcallback.cc:(.text+0x72e): undefined reference to `Fl::flush()' /usr/bin/ld: flcallback.o: in function `cb_update_buttons(Fl_Widget*, void*)': flcallback.cc:(.text+0x82d): undefined reference to `Fl::flush()' /usr/bin/ld: flcallback.o: in function `cb_browse(Fl_Widget*, void*)': flcallback.cc:(.text+0xad3): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.o: in function `cb_browse_aa_aln(Fl_Widget*, void*)': flcallback.cc:(.text+0xb53): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.o: in function `cb_browse_nt_seq(Fl_Widget*, void*)': flcallback.cc:(.text+0xbd3): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.o: in function `cb_browse_nt_aln(Fl_Widget*, void*)': flcallback.cc:(.text+0xc53): undefined reference to `Fl_Widget::redraw()' /usr/bin/ld: flcallback.o: in function `cb_type(Fl_Widget*, void*)': flcallback.cc:(.text+0xccc): undefined reference to `Fl_Widget::redraw()' collect2: error: ld returned 1 exit status install: cannot stat 'fltreebest': No such file or directory fakeroot -- sh treebest-ensembl.SlackBuild Failed