bowtie2: bowtie2 (A tool for aligning sequencing reads) bowtie2: bowtie2: Bowtie 2 is an ultrafast and memory-efficient tool for aligning bowtie2: sequencing reads to long reference sequences. It is particularly bowtie2: good at aligning reads of about 50 up to 100s or 1,000s of bowtie2: characters, and particularly good at aligning to relatively long bowtie2: (e.g. mammalian) genomes. bowtie2: bowtie2: Home: https://bowtie-bio.sf.net/bowtie2 bowtie2: Reference: Langmead B, Salzberg S. Fast gapped-read alignment with bowtie2: Bowtie 2. Nature Methods. 2012, 9:357-359.